PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG049180.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 289aa MW: 32350.3 Da PI: 6.5108

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG049180.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	49.8	1.1e-15	4	89	56	128
NAM 56 kewyfFskrdkkyatgkrknra.........tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge....ktdWvmheyrl 128 ++ +fF+k +++y g+rk+r+ + +W++tgk+k++l+++g +g kk+Lv+ ++++g kt+W+mh+y+l TRIDC2AG049180.3 4 RNNHFFHKVSNAYDVGQRKRRKisnsdhvvcDVHFRWHKTGKSKKILDNNGVIKGWKKILVLMMRSRKDGItsrtKTNWTMHQYHL 89 577****************856666665433677***********************655554433333*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MDGRNNHFFH KVSNAYDVGQ RKRRKISNSD HVVCDVHFRW HKTGKSKKIL DNNGVIKGWK 60 KILVLMMRSR KDGITSRTKT NWTMHQYHLG VDQDEKHGEL VVSKVFYQSK KDEQSVMCLV 120 NEESDPFAGK IDPTTPMTYP PQPRPPNSSP SRTEKNQEEH VALSGPDERP SRGATPDFVY 180 PEMQPFPLGL DALQGLPDPK IPLGFSHMAS WFAGTSSHSN ALEDAPLSCL DERLPHGGTL 240 DAAYPDPEGQ ALPLDAEALQ GLPDFGTPSN IFPQDLQFGS QDIFWGEGF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	47	RKRRKISNSDHVVCDVHFRWHKTGKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-28	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG049180.3