PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG049080.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 289aa MW: 32379.2 Da PI: 6.1811

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG049080.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	48.2	3.6e-15	4	89	56	128
NAM 56 kewyfFskrdkkyatgkrknra.........tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge....ktdWvmheyrl 128 ++ +fF+k +++y g+rk+r+ + +W++tgk+ke+ +k+g +g kk+Lv+ ++++g kt+W+mh+y+l TRIDC2AG049080.2 4 RKSHFFHKISNAYDVGQRKRRKisnsdhvvrDVHFRWQKTGKSKEISDKNGVIKGWKKILVLMMRSRKDGItsrtKTNWTMHQYHL 89 678****************856766664422567***********************655554433333*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MDGRKSHFFH KISNAYDVGQ RKRRKISNSD HVVRDVHFRW QKTGKSKEIS DKNGVIKGWK 60 KILVLMMRSR KDGITSRTKT NWTMHQYHLG VDQDEKHGEP VVSKVFYQSK KDEQPVMCPV 120 NEESDPFAGE IDTTTPMTYP PLPRPPNSSP SRTEQNQEEH AALSGPDERP SRGATPDSVY 180 PEMQLFPLGL DALQGLPDPR MTPGFSHMAS WFAGTSSYSN ALENAPLSGL DECLPHGGTL 240 DAAYPDPEGQ ALPLDAEALQ GFPDLGMPPN IFPQDLQFRS QDIFWGEGF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	47	RKRRKISNSDHVVRDVHFRWQKTGKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56620.1	1e-26	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG049080.2