PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG048980.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 804aa MW: 91396.8 Da PI: 8.8979

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG048980.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.8	4.8e-20	56	139	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y eY++++GF v+k++s++ +g +++tfvC+k g ++ + + r+r + +tgCka+++vk + +++wev +eleHnH+++ TRIDC2AG048980.4 56 YLEYGYRAGFGVSKRTSHSV--DGVKYRATFVCYKGGIARIKPGL---KARRRLVAKTGCKAMMVVKYNAsENHWEVVFVELEHNHPCN 139 99***********99988..9999**********99887...8999*************99*************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MDSLQSDPYT RSSLQMQLID TSTSFETSNL DSVKHEVPTP QVGMTFETVD LAYQSYLEYG 60 YRAGFGVSKR TSHSVDGVKY RATFVCYKGG IARIKPGLKA RRRLVAKTGC KAMMVVKYNA 120 SENHWEVVFV ELEHNHPCNP EMVRFMMCFK DLPDWQREHR PFNAKTRLNP KIHSGRGRPP 180 NQNKDFMVRS FSQSNYSIEA AAKCGKLRFA EGDVEALLVF FDKMQAQNSN FFYNWDMDDE 240 GRLKNVCWVD ARSRAAYQHF SDVVCFDTVY LTYQFVIPLV AFLGINHHGQ FVLLGCGLLG 300 DESPETFSWL FKKWLKCMND KAPEAIITTH SRPVVKAVSE VFLNTRHRYN LWHIMKELPD 360 MSGRVEDKEA ISLRMKKVVY DTITAADFER EWVEMANQYK LHDNRWLTTL FEERAKWVPA 420 YVKDAFWAGI STVRRSERLE AFFDGYITPE TTIKIFIEQF DTAMKLRSDR EAYDDFRSFQ 480 QRPQALSGLL FEEQFANAYT INIFQKFQDQ LKQLMNVTCT EVSRNGSIVT YTVTVIGKER 540 KFDYRVMYNS AEKEVWCICR SLQFKGILCS HALAVLKQEL VMLIPSKYIL DRWRKDYKCP 600 EESKETPIPP ESAKATGKGT KPENVREDKV DNLYNDGHQY FADIVEMGAT DPDAMEYVLS 660 VMKEAKEKVR RFEESRKEKR PEGNPVSSSK KGAKSAKPPS AEDVGNSTSV SAPANTAMAT 720 VAPTMMVAAA SATLPTMMAM ATTSAAVPPG MFLVPMHPHM VFPPFTPGLP AAVPPVAPPP 780 APTANAVGVV SNPTKKRKKR KGNS

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MDSLQSDPYT RSSLQMQLID TSTSFETSNL DSVKHEVPTP QVGMTFETVD LAYQSYLEYG  60
YRAGFGVSKR TSHSVDGVKY RATFVCYKGG IARIKPGLKA RRRLVAKTGC KAMMVVKYNA  120
SENHWEVVFV ELEHNHPCNP EMVRFMMCFK DLPDWQREHR PFNAKTRLNP KIHSGRGRPP  180
NQNKDFMVRS FSQSNYSIEA AAKCGKLRFA EGDVEALLVF FDKMQAQNSN FFYNWDMDDE  240
GRLKNVCWVD ARSRAAYQHF SDVVCFDTVY LTYQFVIPLV AFLGINHHGQ FVLLGCGLLG  300
DESPETFSWL FKKWLKCMND KAPEAIITTH SRPVVKAVSE VFLNTRHRYN LWHIMKELPD  360
MSGRVEDKEA ISLRMKKVVY DTITAADFER EWVEMANQYK LHDNRWLTTL FEERAKWVPA  420
YVKDAFWAGI STVRRSERLE AFFDGYITPE TTIKIFIEQF DTAMKLRSDR EAYDDFRSFQ  480
QRPQALSGLL FEEQFANAYT INIFQKFQDQ LKQLMNVTCT EVSRNGSIVT YTVTVIGKER  540
KFDYRVMYNS AEKEVWCICR SLQFKGILCS HALAVLKQEL VMLIPSKYIL DRWRKDYKCP  600
EESKETPIPP ESAKATGKGT KPENVREDKV DNLYNDGHQY FADIVEMGAT DPDAMEYVLS  660
VMKEAKEKVR RFEESRKEKR PEGNPVSSSK KGAKSAKPPS AEDVGNSTSV SAPANTAMAT  720
VAPTMMVAAA SATLPTMMAM ATTSAAVPPG MFLVPMHPHM VFPPFTPGLP AAVPPVAPPP  780
APTANAVGVV SNPTKKRKKR KGNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	795	799	KKRKK
2	795	801	KKRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-110	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG048980.4