PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG047930.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 329aa    MW: 36334 Da    PI: 9.2325
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG047930.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.1e-05103124323
                       ETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                       C  Cg+ F+ ++ L rH  t H
  TRIDC2AG047930.2 103 CRVCGRKFRARDALLRHFDTiH 124
                       9****************88877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MSRPLYNLRR RLLASTLRVL PSPSHRLSTT TSTPATRAPT TPVAVLWDLA ASRPPSKHPL  60
YDSAVRLHLA ASSFGRLRFS AAFLHPCHRL PDPDPSADAT NLCRVCGRKF RARDALLRHF  120
DTIHTREHAK RLERIESSRG DRRVRLAASL SFKLSKYTKA ARELTAGVNP GSPADELRRA  180
GVHAELSRYP STALRDRAQE VLDDGSVGCL LLVSGREELS PLLRLAKEKG VRSVVVGGES  240
GLARWADTGF TWAEVIAGKA RKAAPSMSGK WRDRDVLKGL EWRYEDDDEE DVMFEEDGDG  300
DGSEELAGSA NGKPWWKLES DGEDSSLCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.12e-44C2H2 family protein