PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG047550.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 260aa MW: 28778.2 Da PI: 11.1805 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.5 | 1.3e-53 | 3 | 127 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+++yL+kkv++ ++ + +++ +d++k+ePwdLp+ ++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdk+++ TRIDC2AG047550.8 3 LPPGFRFHPTDEELITHYLAKKVADARFAA-LAVSVADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIF 94 79*************************999.569999***********8778899************************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyr 127 + +++lvg+kktLvfy+grapkg k+ Wvmhey TRIDC2AG047550.8 95 R-GKALVGMKKTLVFYTGRAPKGDKSGWVMHEYL 127 *.99*****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDLPPGFRFH PTDEELITHY LAKKVADARF AALAVSVADL NKCEPWDLPS LARMGEKEWY 60 FFCLKDRKYP TGLRTNRATE SGYWKATGKD KDIFRGKALV GMKKTLVFYT GRAPKGDKSG 120 WVMHEYLISG RPVIFAERVG AVQGVQEEPA RRRSVVGAGV VSSKEKRRGD DGGDRVLRGR 180 RHPAPSAPGH VRLRRLLRRP GGARDLLLQQ RAGGGPVLQP NGDGRLRHGH GPPRPSLIVL 240 PVGKLHAVRG PAAPRREPEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-75 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG047550.8 |