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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG047550.7 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | NAC | ||||||||
| Protein Properties | Length: 306aa MW: 33538.5 Da PI: 11.4766 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 174.7 | 2.6e-54 | 10 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeel+++yL+kkv++ ++ + +++ +d++k+ePwdLp+ ++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdk+++
TRIDC2AG047550.7 10 LPPGFRFHPTDEELITHYLAKKVADARFAA-LAVSVADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIF 101
79*************************999.569999***********8778899************************************** PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +++lvg+kktLvfy+grapkg k+ Wvmheyrl
TRIDC2AG047550.7 102 R-GKALVGMKKTLVFYTGRAPKGDKSGWVMHEYRL 135
*.99*****************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 306 aa Download sequence |
GEQEQHAMDL PPGFRFHPTD EELITHYLAK KVADARFAAL AVSVADLNKC EPWDLPSLAR 60 MGEKEWYFFC LKDRKYPTGL RTNRATESGY WKATGKDKDI FRGKALVGMK KTLVFYTGRA 120 PKGDKSGWVM HEYRLNAKLH AAIISGRPVI FAERVGAVQG VQEEPARRRS VVGAGVVSSK 180 EKRRGDDGGD RVLRGRRHPA PSAPGHVRLR RLLRRPGGAR DLLLQQRAGG GPVLQPNGDG 240 RLRHGHGPPR PSLIVLPVGK LHAVRGPAAP RREPEPGAAP GEQRVPPRSR RRHGAVRQSA 300 AAAGGV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G61430.1 | 1e-78 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG047550.7 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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