PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG047550.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 387aa MW: 42173.5 Da PI: 8.5471

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG047550.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174	4.4e-54	45	170	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+++yL+kkv++ ++ + +++ +d++k+ePwdLp+ ++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdk+++ TRIDC2AG047550.2 45 LPPGFRFHPTDEELITHYLAKKVADARFAA-LAVSVADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIF 136 79***********************999.569999*******8778899************************************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++lvg+kktLvfy+grapkg k+ Wvmheyrl TRIDC2AG047550.2 137 R-GKALVGMKKTLVFYTGRAPKGDKSGWVMHEYRL 170 .99****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
PLYFLSTTPL RSIRCRLSPY HHHQFQKREK QVMEHGEQEQ HAMDLPPGFR FHPTDEELIT 60 HYLAKKVADA RFAALAVSVA DLNKCEPWDL PSLARMGEKE WYFFCLKDRK YPTGLRTNRA 120 TESGYWKATG KDKDIFRGKA LVGMKKTLVF YTGRAPKGDK SGWVMHEYRL NAKLHAASTS 180 RGSLSGGRAA SSRNEWVLCR VFKKSLLGGV VSSAPASSAA KKSGVGTMEE IGSSVAAVTP 240 LPPLLDMSGS GASFVDPAAH VTCFSNNALE AGQFFNPTAT GGCATDTDHH GLASSYSPLA 300 SFTQYGGQLH HGVSLSLVQL LESSGYHRGL ADDMAPCGNQ QQQPAACKGE RERLSASQDT 360 GLTSDVNPEI SSSFGQKFDH EPAPWGY

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

PLYFLSTTPL RSIRCRLSPY HHHQFQKREK QVMEHGEQEQ HAMDLPPGFR FHPTDEELIT  60
HYLAKKVADA RFAALAVSVA DLNKCEPWDL PSLARMGEKE WYFFCLKDRK YPTGLRTNRA  120
TESGYWKATG KDKDIFRGKA LVGMKKTLVF YTGRAPKGDK SGWVMHEYRL NAKLHAASTS  180
RGSLSGGRAA SSRNEWVLCR VFKKSLLGGV VSSAPASSAA KKSGVGTMEE IGSSVAAVTP  240
LPPLLDMSGS GASFVDPAAH VTCFSNNALE AGQFFNPTAT GGCATDTDHH GLASSYSPLA  300
SFTQYGGQLH HGVSLSLVQL LESSGYHRGL ADDMAPCGNQ QQQPAACKGE RERLSASQDT  360
GLTSDVNPEI SSSFGQKFDH EPAPWGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.1	3e-86	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG047550.2