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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG045390.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | NAC | ||||||||
| Protein Properties | Length: 336aa MW: 37106.1 Da PI: 6.836 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 167.8 | 3.6e-52 | 10 | 139 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
+ppGfrFhPtdeel+ +yLkkk+ +k++l evi+evd++k+ePwdL++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk
TRIDC2AG045390.1 10 VPPGFRFHPTDEELLLYYLKKKIGFEKFDL-EVIREVDLNKIEPWDLQErcRIGSaPQNEWYFFSHKDRKYPTGSRTNRATTAGFWKATGRDK 101
69****************************.99**************963433332566********************************** PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+ + + +++g++ktLvfy+grap+g+k+dW+mheyrle
TRIDC2AG045390.1 102 CIRT-SYRKIGMRKTLVFYRGRAPHGQKSDWIMHEYRLE 139
***9.8999****************************85 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 336 aa Download sequence |
MADFSSSNGV PPGFRFHPTD EELLLYYLKK KIGFEKFDLE VIREVDLNKI EPWDLQERCR 60 IGSAPQNEWY FFSHKDRKYP TGSRTNRATT AGFWKATGRD KCIRTSYRKI GMRKTLVFYR 120 GRAPHGQKSD WIMHEYRLEE IDEAQGGTSE DGWVVCRVFK KKCFFKIAGG GEGSSSQSAD 180 AGGGHMAVSS PLGGHDHADR AAMASHYMHG MHPQYHPQHA SSFYYSQMQP PEAAYSHHVQ 240 VQDLLTNHRP AADAAGGGYD FSGLPVEHPG LDVGSSDGVA ADGLAEGRDQ TNGAADQQWQ 300 PMDGFSNGGG AAAVQQMSAM NSGQRGGEMD LWGYGR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G10350.1 | 2e-91 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG045390.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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