PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG044110.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 480aa    MW: 51409.7 Da    PI: 6.8496
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG044110.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS271.13.7e-83704692374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                        +lLl+ A a + gd+++a  +L+++  +as +g dp qR+aayf+ ALa+rl+   +  +k     +t++++ +e++ a+++f+++sP+++f
  TRIDC2AG044110.2  70 MRLLLSSAVAGEVGDTHAAAVALQEVYRHASFRGgDPAQRVAAYFADALASRLLL--PPPAK----AKTTTTTREEQFLAFTMFYQASPFYQF 156
                       6899**************************99999*******************8..33332....2333344688889999*********** PP

              GRAS  94 shltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRpeg................ppslRiTgvgspesgskeeleetgerLakf 168
                       +h+taNqaI+ea+e    +r+H++Dfd+s G+QWp+L+q+L++ +                  p slRiTg+g+    s++el+ t+ rLa+f
  TRIDC2AG044110.2 157 AHFTANQAIVEAFEAGgrRRLHVVDFDVSFGFQWPSLIQSLSDAATTsssqssqddsgdccdePVSLRITGFGA----SADELRDTEARLARF 245
                       *************9766699*********************977722345677888999999677*********....9************** PP

              GRAS 169 Aeel.gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..........adhns 250
                       A+ + +++fef+ +v +  ed + e+++++p  +++Vnlv+   +  + s   +   ++ L  ++sl+P +v ++++             ++s
  TRIDC2AG044110.2 246 ADGCpNLRFEFEGVVNNGPEDGRHERIKTDPAATVVVNLVFPAAQNARASSWDP---RSALAHIRSLNPSLVFLIDKVdegsgggkgaGRCGS 335
                       **9769*******9999************************8877764443333...58***************9974233444444223366 PP

              GRAS 251 esFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerre....rhetlekWrerleeaGFkpvplsekaakqakl 339
                       +s+l rf+  l+yy+a+f+sl++ lp++s eri +Er  lg ei+++ a   ++r +      +  + W+erle+aGF+ ++ls+++++qakl
  TRIDC2AG044110.2 336 ASLLPRFAANLRYYAAVFESLHECLPADSAERIAIERDHLGVEISDAMASLDRRRHAgdraADQMSRGWKERLESAGFEDARLSSRTVSQAKL 428
                       6************************************************9999886511114455678************************* PP

              GRAS 340 llrkvk.sdg...yrveee..sgslvlgWkdrpLvsvSaWr 374
                       ll++ + + g   +rv e    +++ lgW+dr+L++++aWr
  TRIDC2AG044110.2 429 LLKMKSgGCGgggFRVTEAgdGKAMALGWRDRALITATAWR 469
                       **98664333344***9875245556**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MNLTLSLGVN GGGAAAKKRK VMDGVGDVAA ADGGDRATVM RLLQARDRMV KVELDHEDGD  60
VSGSGPSPLM RLLLSSAVAG EVGDTHAAAV ALQEVYRHAS FRGGDPAQRV AAYFADALAS  120
RLLLPPPAKA KTTTTTREEQ FLAFTMFYQA SPFYQFAHFT ANQAIVEAFE AGGRRRLHVV  180
DFDVSFGFQW PSLIQSLSDA ATTSSSQSSQ DDSGDCCDEP VSLRITGFGA SADELRDTEA  240
RLARFADGCP NLRFEFEGVV NNGPEDGRHE RIKTDPAATV VVNLVFPAAQ NARASSWDPR  300
SALAHIRSLN PSLVFLIDKV DEGSGGGKGA GRCGSASLLP RFAANLRYYA AVFESLHECL  360
PADSAERIAI ERDHLGVEIS DAMASLDRRR HAGDRAADQM SRGWKERLES AGFEDARLSS  420
RTVSQAKLLL KMKSGGCGGG GFRVTEAGDG KAMALGWRDR ALITATAWRP CRRSVGKNEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.17e-39GRAS family protein