PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG042040.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 358aa MW: 41628.7 Da PI: 6.8759

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG042040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.6	7.7e-22	36	116	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YA +vGFsvrks++k++ +++i ++ vCs+eg+re++++k +trtgC+a+++ + +kdg w v+kl +eHnH la TRIDC2AG042040.1 36 DMYNAYAAKVGFSVRKSHTKRR-GDKSISQKYIVCSNEGHRETQSSK--------DTTRTGCEARIQFSVSKDGIWTVQKLITEHNHYLA 116 58************998776.8888**********998776........99****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
GVAGVEQHMQ AIDKVGETLI VPEVGLAFDS EDSAYDMYNA YAAKVGFSVR KSHTKRRGDK 60 SISQKYIVCS NEGHRETQSS KDTTRTGCEA RIQFSVSKDG IWTVQKLITE HNHYLASPNK 120 VHKLRSQRRV IEADRHLIGQ IREAGMKPSQ VYDFMVAFYG GPDKVPFSKM DCNNEIGRER 180 KKYLESNDAQ TLLEYLKNKQ REDPTFFYAI QIDQVDGQIA NFFWADDRSE FYFNKKWFEL 240 LDQYNLEDNE WMKKLYELRE KWAAVYRDSF TADMNSTQRS EECEKVSGSL RENELDADFS 300 SRRKKPVAYS PNFPLLKTAS ESYTRRMYSE FETEFKSQFS FSCKLLQTDG PVLTYMVT

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

GVAGVEQHMQ AIDKVGETLI VPEVGLAFDS EDSAYDMYNA YAAKVGFSVR KSHTKRRGDK  60
SISQKYIVCS NEGHRETQSS KDTTRTGCEA RIQFSVSKDG IWTVQKLITE HNHYLASPNK  120
VHKLRSQRRV IEADRHLIGQ IREAGMKPSQ VYDFMVAFYG GPDKVPFSKM DCNNEIGRER  180
KKYLESNDAQ TLLEYLKNKQ REDPTFFYAI QIDQVDGQIA NFFWADDRSE FYFNKKWFEL  240
LDQYNLEDNE WMKKLYELRE KWAAVYRDSF TADMNSTQRS EECEKVSGSL RENELDADFS  300
SRRKKPVAYS PNFPLLKTAS ESYTRRMYSE FETEFKSQFS FSCKLLQTDG PVLTYMVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-39	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG042040.1