PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG041770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 26620.7 Da PI: 10.0298 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.2 | 6.4e-21 | 51 | 100 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g TRIDC2AG041770.1 51 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAIAYDEAALRFKG 100 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
VSALSHVIRA TPEQQQAYYP AGSAAVSGEQ QHQHDAAAAA AIAEEQGRKR HYRGVRQRPW 60 GKWAAEIRDP KKAARVWLGT FDTAEDAAIA YDEAALRFKG TKAKLNFPER VQGRTDLGFV 120 VTRGIPDRLQ QQQHYPATVG APAMRPPPHQ TVVPYPDLMR YAQLLQGAGS AGGAVNLPFG 180 AMSPPSMSSS SPHILDFSTQ QLIRVSPASP AAAISSSGTT GPSTSSSTTT ASSPGAAWPY 240 TGEHKNNKDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 2e-33 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG041770.1 |