PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG041070.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 997aa MW: 111305 Da PI: 5.5074

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG041070.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	170.2	3.1e-53	12	127	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwlk++e++ iL n+e+ ++t+e+ ++p+sg+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg++++l+cyYah+e+np f TRIDC2AG041070.6 12 REaKSRWLKPSEVYYILLNHEQLQITHEPLNKPPSGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNIDALSCYYAHGEQNPYF 104 4559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 qrrc+w+Le ++++ivlv+y+ev TRIDC2AG041070.6 105 QRRCFWMLEPAYDHIVLVQYREV 127 *******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 997 aa Download sequence
PLVGFDINVL LREAKSRWLK PSEVYYILLN HEQLQITHEP LNKPPSGALF LYNRRVNRFF 60 RKDGYAWRRK KDGRTVGEAH ERLKVGNIDA LSCYYAHGEQ NPYFQRRCFW MLEPAYDHIV 120 LVQYREVAEG RYYSTLSNGS AGSLSTLSYP NDIHGKHGST SDFSEGNESH QSSVTEVSSY 180 SANKEYNHDS GVLLSIPELQ QSTVMGMPEL DQSSLERSSE FCMVNNNDST NTSGLNQALK 240 SIAEQLSLGD DDYIYINQAR SLDFTTNTEA ADVQGNQTSN SLGDDEANQI RPEGAHGVGR 300 GISSSWENVL QSDLGLPASS TYQFGAHYQQ SSEYQPPGGL DGSNLQLQIS AAKRFLLGSE 360 DPIDSPSYNF IPRDEGINGI NTLSAHDSSL ESCLNPDWQR TTPVTLQSSS YQSNSCGYEI 420 SEFFDNGQFE PSSEEDTRLA LKQKQQFSIR EISPEWAFCY EITKVIITGD FLCDPSNICW 480 AVMFGDTEVP VEIVQPGVLR CHTPLHSAGK LTLCITTGNR KVCSEIKDFE FRAKSTASSF 540 TDFAPSSMKS TEELSLLAKF ARILLCDNGS SAASGDDPQP GQSPKLKMNE DNWQRLINEL 600 DVGCENPLSR VDWIMEELLK SKLQQWLSLR LQGDDGTCSL SKNEQGIIHL ISALGYDWAL 660 SSVLSAGVGI NLRDSNGWTA LHWAAYYGRE KMVAALLAAG ASAPAVTDPT AQDPVGKSAA 720 FLASERGHVG LAGYLSEVAL TSYLASLTIE ESGISEGLAA IKAERAVESI SQRSAQLHGG 780 TEDELSLKDS LAAVRNAAQA AARIQNAFRA FSFRRRQHKD ARLKDEYGMT QEDIDELAAA 840 SRLYYQHHVS NGQFCDKAAV SIQKKYRGWK GRKNFLQMRR NVVKIQAHVR GHQVRKKYKT 900 FVSTVSVLEK VILRWRRKGH GLRGFRAEQS VMIEAEEGEE EDDDDFEDDE AVKIFRRQKV 960 DESVKESVSR VLSMVDSPEA RMQYRRMLEE FRQMNCK

Sequence ? help Back to Top

Protein Sequence Length: 997 aa Download sequence

PLVGFDINVL LREAKSRWLK PSEVYYILLN HEQLQITHEP LNKPPSGALF LYNRRVNRFF  60
RKDGYAWRRK KDGRTVGEAH ERLKVGNIDA LSCYYAHGEQ NPYFQRRCFW MLEPAYDHIV  120
LVQYREVAEG RYYSTLSNGS AGSLSTLSYP NDIHGKHGST SDFSEGNESH QSSVTEVSSY  180
SANKEYNHDS GVLLSIPELQ QSTVMGMPEL DQSSLERSSE FCMVNNNDST NTSGLNQALK  240
SIAEQLSLGD DDYIYINQAR SLDFTTNTEA ADVQGNQTSN SLGDDEANQI RPEGAHGVGR  300
GISSSWENVL QSDLGLPASS TYQFGAHYQQ SSEYQPPGGL DGSNLQLQIS AAKRFLLGSE  360
DPIDSPSYNF IPRDEGINGI NTLSAHDSSL ESCLNPDWQR TTPVTLQSSS YQSNSCGYEI  420
SEFFDNGQFE PSSEEDTRLA LKQKQQFSIR EISPEWAFCY EITKVIITGD FLCDPSNICW  480
AVMFGDTEVP VEIVQPGVLR CHTPLHSAGK LTLCITTGNR KVCSEIKDFE FRAKSTASSF  540
TDFAPSSMKS TEELSLLAKF ARILLCDNGS SAASGDDPQP GQSPKLKMNE DNWQRLINEL  600
DVGCENPLSR VDWIMEELLK SKLQQWLSLR LQGDDGTCSL SKNEQGIIHL ISALGYDWAL  660
SSVLSAGVGI NLRDSNGWTA LHWAAYYGRE KMVAALLAAG ASAPAVTDPT AQDPVGKSAA  720
FLASERGHVG LAGYLSEVAL TSYLASLTIE ESGISEGLAA IKAERAVESI SQRSAQLHGG  780
TEDELSLKDS LAAVRNAAQA AARIQNAFRA FSFRRRQHKD ARLKDEYGMT QEDIDELAAA  840
SRLYYQHHVS NGQFCDKAAV SIQKKYRGWK GRKNFLQMRR NVVKIQAHVR GHQVRKKYKT  900
FVSTVSVLEK VILRWRRKGH GLRGFRAEQS VMIEAEEGEE EDDDDFEDDE AVKIFRRQKV  960
DESVKESVSR VLSMVDSPEA RMQYRRMLEE FRQMNCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	1e-137	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG041070.6