PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG041070.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1047aa MW: 116757 Da PI: 5.4445

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG041070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	134.2	4.6e-42	71	152	36	117
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 g+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg++++l+cyYah+e+np fqrrc+w+Le ++++ivlv+y+ev TRIDC2AG041070.1 71 GGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNIDALSCYYAHGEQNPYFQRRCFWMLEPAYDHIVLVQYREV 152 599*****************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1047 aa Download sequence
MSQSFDINVL LREAKSRWLK PSEVYYILLN HEQLQITHEP LNKPPSKHIS LILRNLLLLL 60 FYNNSVICSL GGALFLYNRR VNRFFRKDGY AWRRKKDGRT VGEAHERLKV GNIDALSCYY 120 AHGEQNPYFQ RRCFWMLEPA YDHIVLVQYR EVAEGRYYST LSNGSAGSLS TLSYPNDIHG 180 KHGSTSDFSE GNESHQSSVT EVSSYSANKE YNHDSGVLLS IPELQQSTVM GMPELDQSSL 240 ERSSEFCMVN NNDSTNTSGL NQALKSIAEQ LSLGDDDYIY INQARSLDFT TNTEAADVQG 300 NQTSNSLGDD EANQIRPEGA HGVGRGISSS WENVLQSDLG LPASSTYQFG AHYQQSSEYQ 360 PPGGLDGSNL QLQISAAKRF LLGSEDPIDS PSYNFIPRDE GINGINTLSA HDSSLESCLN 420 PDWQRTTPVT LQSSSYQSNS CGYEISEFFD NGQFEPSSEE DTRLALKQKQ QFSIREISPE 480 WAFCYEITKV IITGDFLCDP SNICWAVMFG DTEVPVEIVQ PGVLRCHTPL HSAGKLTLCI 540 TTGNRKVCSE IKDFEFRAKS TASSFTDFAP SSMKSTEELS LLAKFARILL CDNGSSAASG 600 DDPQPGQSPK LKMNEDNWQR LINELDVGCE NPLSRVDWIM EELLKSKLQQ WLSLRLQGDD 660 GTCSLSKNEQ GIIHLISALG YDWALSSVLS AGVGINLRDS NGWTALHWAA YYGREKMVAA 720 LLAAGASAPA VTDPTAQDPV GKSAAFLASE RGHVGLAGYL SEVALTSYLA SLTIEESGIS 780 EGLAAIKAER AVESISQRSA QLHGGTEDEL SLKDSLAAVR NAAQAAARIQ NAFRAFSFRR 840 RQHKDARLKD EYGMTQEDID ELAAASRLYY QHHVSNGQFC DKAAVSIQKK YRGWKGRKNF 900 LQMRRNVVKI QAHVRGHQVR KKYKTFVSTV SVLEKVILRW RRKGHGLRGF RAEQSVMIEA 960 EEGEEEDDDD FEDDEAVKIF RRQKVDESVK ESVSRVLSMV DSPEARMQYR RMLEEFRQAT 1020 AELGASDKAT SSILDNDLLV EINKFTC

Sequence ? help Back to Top

Protein Sequence Length: 1047 aa Download sequence

MSQSFDINVL LREAKSRWLK PSEVYYILLN HEQLQITHEP LNKPPSKHIS LILRNLLLLL  60
FYNNSVICSL GGALFLYNRR VNRFFRKDGY AWRRKKDGRT VGEAHERLKV GNIDALSCYY  120
AHGEQNPYFQ RRCFWMLEPA YDHIVLVQYR EVAEGRYYST LSNGSAGSLS TLSYPNDIHG  180
KHGSTSDFSE GNESHQSSVT EVSSYSANKE YNHDSGVLLS IPELQQSTVM GMPELDQSSL  240
ERSSEFCMVN NNDSTNTSGL NQALKSIAEQ LSLGDDDYIY INQARSLDFT TNTEAADVQG  300
NQTSNSLGDD EANQIRPEGA HGVGRGISSS WENVLQSDLG LPASSTYQFG AHYQQSSEYQ  360
PPGGLDGSNL QLQISAAKRF LLGSEDPIDS PSYNFIPRDE GINGINTLSA HDSSLESCLN  420
PDWQRTTPVT LQSSSYQSNS CGYEISEFFD NGQFEPSSEE DTRLALKQKQ QFSIREISPE  480
WAFCYEITKV IITGDFLCDP SNICWAVMFG DTEVPVEIVQ PGVLRCHTPL HSAGKLTLCI  540
TTGNRKVCSE IKDFEFRAKS TASSFTDFAP SSMKSTEELS LLAKFARILL CDNGSSAASG  600
DDPQPGQSPK LKMNEDNWQR LINELDVGCE NPLSRVDWIM EELLKSKLQQ WLSLRLQGDD  660
GTCSLSKNEQ GIIHLISALG YDWALSSVLS AGVGINLRDS NGWTALHWAA YYGREKMVAA  720
LLAAGASAPA VTDPTAQDPV GKSAAFLASE RGHVGLAGYL SEVALTSYLA SLTIEESGIS  780
EGLAAIKAER AVESISQRSA QLHGGTEDEL SLKDSLAAVR NAAQAAARIQ NAFRAFSFRR  840
RQHKDARLKD EYGMTQEDID ELAAASRLYY QHHVSNGQFC DKAAVSIQKK YRGWKGRKNF  900
LQMRRNVVKI QAHVRGHQVR KKYKTFVSTV SVLEKVILRW RRKGHGLRGF RAEQSVMIEA  960
EEGEEEDDDD FEDDEAVKIF RRQKVDESVK ESVSRVLSMV DSPEARMQYR RMLEEFRQAT  1020
AELGASDKAT SSILDNDLLV EINKFTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	1e-130	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG041070.1