PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG041000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 71aa    MW: 8098.61 Da    PI: 11.8271
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG041000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF56.24.5e-181261250
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T.TSEEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss.tgklyeys 50
                      rie+ ++r + f kRr+g+ KKAeEL  LCda+v ++++s+ +g+++ ++
  TRIDC2AG041000.1 12 RIEDRRRRGICFRKRRAGLVKKAEELAMLCDADVGLLVISPfDGTFQRFA 61
                      8***************************************8678877775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
MARQRGRVVL RRIEDRRRRG ICFRKRRAGL VKKAEELAML CDADVGLLVI SPFDGTFQRF  60
AAPATYVPVP P