PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG039110.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 270aa    MW: 29969 Da    PI: 5.241
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG039110.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.9e-1375118654
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         +Er RR+++N+++ +Lr+++P+      +K++Ka+i + A+eYI++L
  TRIDC2AG039110.3  75 ILMERDRRRKLNEKLYTLRSVVPNI-----TKMDKASIIKDAIEYIQQL 118
                       579*********************7.....7*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDPDMGENFA YYWETQRYLE SEELVDSIFV GATEDAISYY DSSSPDGSHS SSTPMGAAMP  60
GAGMGMSGTG ANKNILMERD RRRKLNEKLY TLRSVVPNIT KMDKASIIKD AIEYIQQLHA  120
EERQMEAEVS ALESATGAED DYDGGLSVDQ VSSAQRKKVK RALSVSSMND ALLAAAAAVA  180
SPPVEVLELR VSEVSEKVLV VSVTCSKQRD AMTKVCRALE ELRLRVITAN ITSVSGCLMQ  240
TLFVEVRRRR PPQFMSNSSF PRFYPIRWHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.41e-36bHLH family protein