PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG039110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 297aa    MW: 32508.6 Da    PI: 4.5667
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG039110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.7e-13100143654
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         +Er RR+++N+++ +Lr+++P+      +K++Ka+i + A+eYI++L
  TRIDC2AG039110.1 100 ILMERDRRRKLNEKLYTLRSVVPNI-----TKMDKASIIKDAIEYIQQL 143
                       579*********************7.....7*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
KSDRATEQRR AAASDEPEGR RKKEVMDPDM GENFAYYWET QRYLESEELV DSIFVGATED  60
AISYYDSSSP DGSHSSSTPM GAAMPGAGMG MSGTGANKNI LMERDRRRKL NEKLYTLRSV  120
VPNITKMDKA SIIKDAIEYI QQLHAEERQM EAEVSALESA TGAEDDYDGG LSVDQVSSAQ  180
RKKVKRALSV SSMNDALLAA AAAVASPPVE VLELRVSEVS EKVLVVSVTC SKQRDAMTKV  240
CRALEELRLR VITANITSVS GCLMQTLFVE VDEMDRFQMK EAVEAALSQL DSTGSPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-39bHLH family protein