PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG035600.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 215aa MW: 23793.1 Da PI: 7.9249 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 56.5 | 5.1e-18 | 29 | 75 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ L+el+P++ K +Ka+iL +A+eY+ksLq TRIDC2AG035600.7 29 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 75 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
REDADDCEAV NETRPQRPAA KRRTRAAEVH NQSERKRRDR INEKMKALQE LVPHCNKSDK 60 ASILDEAIEY LKSLQLQVQI MWMATGMAPM MYPGAHQLMP PMAMGLNSAC MPVAQSLSQL 120 QRVAPFMNHH LPNQMPRVQS PAMDSLNVGN NGVCGEPRNP FLHPGNTLTA ASQLPDMFPY 180 ASQKAQQNQN HQLLPNTDMP ASGPCPPSFA DGTGT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 21 | 38 | KRRTRAAEVHNQSERKRR |
2 | 34 | 39 | ERKRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.1 | 6e-34 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG035600.7 |