PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG035600.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 113aa    MW: 12989.6 Da    PI: 9.3133
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG035600.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH58.31.4e-184288455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                        hn+ Er+RRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC2AG035600.11 42 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 88
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
LLSKRGRDEL GSRREDADDC EAVNETRPQR PAAKRRTRAA EVHNQSERKR RDRINEKMKA  60
LQELVPHCNK SDKASILDEA IEYLKSLQLQ VQVQISKSHP EFLISPQSST VLD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13451KRRTRAAEVHNQSERKRR
24752ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.12e-30bHLH family protein