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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG032170.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 883aa MW: 97142.7 Da PI: 7.262 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 69.4 | 9e-22 | 96 | 197 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkek.dgkwevtk 80 +fY++YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk ++ + + +rtgC a+l++k+ + ++vt+ TRIDC2AG032170.8 96 EFYKAYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetnatdvtvaASPPPPRCPDSRTGCLASLTIKLLPsANAFRVTE 187 6*****************99997666.****************99996666666655443344448899*************99899****** PP FAR1 81 leleHnHela 90 ++ eHnH+la TRIDC2AG032170.8 188 FVAEHNHPLA 197 ********97 PP | |||||||
2 | FAR1 | 69.3 | 9.6e-22 | 243 | 342 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 fYn+YA++vGFsvr+s++k++ +g i++r fvCs+eg +++ k++ r + trtgC+a++++k + +++v+k+ TRIDC2AG032170.8 243 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasisanagggaPGPPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 333 9*************9976655..9******************99999****999999987778888999************************ PP FAR1 82 eleHnHela 90 eHnH+la TRIDC2AG032170.8 334 IAEHNHPLA 342 *******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 883 aa Download sequence |
SSSSSGCSPP SFLQTLAQTL MSTTAHPPAS LSGDSSPTTS GSSSPSSSAA VAGSEEPALL 60 GQATSTSTPS AAGDDAAVPS SPQMGMYFET EDDAYEFYKA YAARLGFVVR KSNKSKNSRH 120 TVTRRLFVCS KQGFRQEPKK PQDETNATDV TVAASPPPPR CPDSRTGCLA SLTIKLLPSA 180 NAFRVTEFVA EHNHPLASAV SAVAMIPSSS SHHTIAAAAS LPDPRDGPRP EMHFETEDDA 240 YAFYNRYAEH VGFSVRRSYK KRKHGVIVSR IFVCSREGVS DRAKHDGLAS ISANAGGGAP 300 GPPRPGPPPT RTGCQARMVI KITPCRTYRV AKFIAEHNHP LANSETVHKL RSHKMRARGH 360 ELGPGELHRR KQGKGVQLGD AGAALEYLEG LQVGNPSLYY AVGMAPDGNL AVNFFWADAK 420 SIIDFRSFGD VVCFDTTYGL NVYGRPFALF VGVDNHKQLL VLGAALLYDD GIQSLKWVFQ 480 AFDDAMRDRQ PKTILIDERS ECAIAAAEVW PGSNHCTSVW HIYHSSKRHL KQVFESSKSF 540 GNALSQCLFD CEDEMEFLSA WEKLIEKHDI GESEWLSRLF LEKEKWALPY RRTVFSADIL 600 STLRKDSMIN ELKRELNEQE DILLFFKRYE TMLEEHRSKK LQADVDGNQV TLPIPSLRML 660 KQSSNAYTPE AFKMFQGEFE AYMNCMSFPC SAVGTVSEYK ITLDEKPSDA IVKFDALDGL 720 ATCSCRKFES VGIQCCHVLK VLDLKNIKEL PEQYILKRWR KDARSVRMGE EPNCGSSSIM 780 RSSLDVRFSN MCRMVSLIAS RAAKSEEAMS YIESQSSVLL KHLDEILQTS YPENGNHDVA 840 SSSQAISFVG NHPDHTTQAR AVADTANGLT SLLGISAYPP VDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-83 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG032170.8 |