PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG032170.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 666aa    MW: 73262.4 Da    PI: 7.6228
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG032170.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.96e-22101202190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkek.dgkwevtk 80 
                       +fY++YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk             ++    + + +rtgC a+l++k+    + ++vt+
  TRIDC2AG032170.7 101 EFYKAYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetnatdvtvaASPPPPRCPDSRTGCLASLTIKLLPsANAFRVTE 192
                       6*****************99997666.****************99996666666655443344448899*************99899****** PP

              FAR1  81 leleHnHela 90 
                       ++ eHnH+la
  TRIDC2AG032170.7 193 FVAEHNHPLA 202
                       ********97 PP
2FAR169.86.4e-22248347290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                       fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++                 r   + trtgC+a++++k +   +++v+k+
  TRIDC2AG032170.7 248 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasisanagggaPGPPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 338
                       9*************9976655..9******************99999****999999987778888999************************ PP

              FAR1  82 eleHnHela 90 
                         eHnH+la
  TRIDC2AG032170.7 339 IAEHNHPLA 347
                       *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 666 aa     Download sequence    
PIHPTSSSSS GCSPPSFLQT LAQTLMSTTA HPPASLSGDS SPTTSGSSSP SSSAAVAGSE  60
EPALLGQATS TSTPSAAGDD AAVPSSPQMG MYFETEDDAY EFYKAYAARL GFVVRKSNKS  120
KNSRHTVTRR LFVCSKQGFR QEPKKPQDET NATDVTVAAS PPPPRCPDSR TGCLASLTIK  180
LLPSANAFRV TEFVAEHNHP LASAVSAVAM IPSSSSHHTI AAAASLPDPR DGPRPEMHFE  240
TEDDAYAFYN RYAEHVGFSV RRSYKKRKHG VIVSRIFVCS REGVSDRAKH DGLASISANA  300
GGGAPGPPRP GPPPTRTGCQ ARMVIKITPC RTYRVAKFIA EHNHPLANSE TVHKLRSHKM  360
RARGHELGPG ELHRRKQGKG VQLGDAGAAL EYLEGLQVGN PSLYYAVGMA PDGNLAVNFF  420
WADAKSIIDF RSFGDVVCFD TTYGLNVYGR PFALFVGVDN HKQLLVLGAA LLYDDGIQSL  480
KWVFQAFDDA MRDRQPKTIL IDERSECAIA AAEVWPGSNH CTSVWHIYHS SKRHLKQVFE  540
SSKSFGNALS QCLFDCEDEM EFLSAWEKLI EKHDIGESEW LSRLFLEKEK WALPYRRTVF  600
SADILSTLRK DSMINELKRE LNEQEDILLF FKRYETMLEE HRSKKLQADV DGNQCGWDSV  660
RVQNNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-59FAR1 family protein