PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2AG032170.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 905aa MW: 99570.5 Da PI: 7.2879 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 69.3 | 9.3e-22 | 118 | 219 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkek.dgkwevtk 80 +fY++YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk ++ + + +rtgC a+l++k+ + ++vt+ TRIDC2AG032170.3 118 EFYKAYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetnatdvtvaASPPPPRCPDSRTGCLASLTIKLLPsANAFRVTE 209 6*****************99997666.****************99996666666655443344448899*************99899****** PP FAR1 81 leleHnHela 90 ++ eHnH+la TRIDC2AG032170.3 210 FVAEHNHPLA 219 ********97 PP | |||||||
2 | FAR1 | 69.2 | 1e-21 | 265 | 364 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 fYn+YA++vGFsvr+s++k++ +g i++r fvCs+eg +++ k++ r + trtgC+a++++k + +++v+k+ TRIDC2AG032170.3 265 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasisanagggaPGPPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 355 9*************9976655..9******************99999****999999987778888999************************ PP FAR1 82 eleHnHela 90 eHnH+la TRIDC2AG032170.3 356 IAEHNHPLA 364 *******97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 905 aa Download sequence |
LINPSTTHIY PQPPPPQPIH PTSSSSSGCS PPSFLQTLAQ TLMSTTAHPP ASLSGDSSPT 60 TSGSSSPSSS AAVAGSEEPA LLGQATSTST PSAAGDDAAV PSSPQMGMYF ETEDDAYEFY 120 KAYAARLGFV VRKSNKSKNS RHTVTRRLFV CSKQGFRQEP KKPQDETNAT DVTVAASPPP 180 PRCPDSRTGC LASLTIKLLP SANAFRVTEF VAEHNHPLAS AVSAVAMIPS SSSHHTIAAA 240 ASLPDPRDGP RPEMHFETED DAYAFYNRYA EHVGFSVRRS YKKRKHGVIV SRIFVCSREG 300 VSDRAKHDGL ASISANAGGG APGPPRPGPP PTRTGCQARM VIKITPCRTY RVAKFIAEHN 360 HPLANSETVH KLRSHKMRAR GHELGPGELH RRKQGKGVQL GDAGAALEYL EGLQVGNPSL 420 YYAVGMAPDG NLAVNFFWAD AKSIIDFRSF GDVVCFDTTY GLNVYGRPFA LFVGVDNHKQ 480 LLVLGAALLY DDGIQSLKWV FQAFDDAMRD RQPKTILIDE RSECAIAAAE VWPGSNHCTS 540 VWHIYHSSKR HLKQVFESSK SFGNALSQCL FDCEDEMEFL SAWEKLIEKH DIGESEWLSR 600 LFLEKEKWAL PYRRTVFSAD ILSTLRKDSM INELKRELNE QEDILLFFKR YETMLEEHRS 660 KKLQADVDGN QVTLPIPSLR MLKQSSNAYT PEAFKMFQGE FEAYMNCMSF PCSAVGTVSE 720 YKITLDEKPS DAIVKFDALD GLATCSCRKF ESVGIQCCHV LKVLDLKNIK ELPEQYILKR 780 WRKDARSVRM GEEPNCGSSS IMRSSLDVRF SNMCRMVSLI ASRAAKSEEA MSYIESQSSV 840 LLKHLDEILQ TSYPENGNHD VASSSQAISF VGNHPDHTTQ ARAVADTANG LTSLLGISAY 900 PPVDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-83 | FAR1 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2AG032170.3 |