PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG023120.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 467aa MW: 49569.8 Da PI: 6.2622

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG023120.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.7	1e-05	108	128	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk Fs++ +L H+++H TRIDC2AG023120.2 108 CRECGKLFSSWRSLFGHMKSH 128 ********************9 PP
2	zf-C2H2	15	6.9e-05	312	334	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp Cg++Fs+ L H +H TRIDC2AG023120.2 312 YECPGCGRVFSSYQALGGHRASH 334 99***********9999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MDAVGELAAA GMHHHHHHHH HRCKVCGKGF SCGRSLGGHM RSHISLGEAL PEADDELIRR 60 SSANGGRASA NGAVGYGLRE NPKKTRRLSD FADEEEDQGG DGGAQRACRE CGKLFSSWRS 120 LFGHMKSHAP GAARDHDEYD EADGDVDLLG EEEYSFAAEA EAEAEKEEEE EEEEMEPAPM 180 EPLVPAPVAV MAAPPRRRRR SMRVAAPAPA PPPPMLSAFE KEQEDVALCL LMLSRDTTGG 240 MRGSPAPKQA HLPRNGYGYN SDDDSALFQY GDAKTKSVAK SKKRRTSHYA LNSASPKQRG 300 EAAPPPAKRT RYECPGCGRV FSSYQALGGH RASHKRINTS CSAPKAAPAA APAPEPSVDT 360 YTSFGTLSPS ASPDSVAIGI GAGSSKKPAA GEAEKFECPV CFRVFGSGQA LGGHKRSHII 420 ADAAFSSDGE LYGSASVSVN EEQEQGYPVA AAGSLDLNFP PAPSEEA

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MDAVGELAAA GMHHHHHHHH HRCKVCGKGF SCGRSLGGHM RSHISLGEAL PEADDELIRR  60
SSANGGRASA NGAVGYGLRE NPKKTRRLSD FADEEEDQGG DGGAQRACRE CGKLFSSWRS  120
LFGHMKSHAP GAARDHDEYD EADGDVDLLG EEEYSFAAEA EAEAEKEEEE EEEEMEPAPM  180
EPLVPAPVAV MAAPPRRRRR SMRVAAPAPA PPPPMLSAFE KEQEDVALCL LMLSRDTTGG  240
MRGSPAPKQA HLPRNGYGYN SDDDSALFQY GDAKTKSVAK SKKRRTSHYA LNSASPKQRG  300
EAAPPPAKRT RYECPGCGRV FSSYQALGGH RASHKRINTS CSAPKAAPAA APAPEPSVDT  360
YTSFGTLSPS ASPDSVAIGI GAGSSKKPAA GEAEKFECPV CFRVFGSGQA LGGHKRSHII  420
ADAAFSSDGE LYGSASVSVN EEQEQGYPVA AAGSLDLNFP PAPSEEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	6e-20	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG023120.2