PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG021900.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 222aa    MW: 24229.9 Da    PI: 10.8224
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG021900.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.12.6e-3270126158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep++VNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh+hA++R+Rg+gGrF
  TRIDC2AG021900.7  70 EEPMFVNAKQYHAILRRRQIRAKLEAQNKL-VKARKPYLHESRHRHAMKRARGTGGRF 126
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MVKPLLSLGN PETVAPPPML DCSQSFAYIP YTADAYAGIF PGYALHAIVH PQLNAATNSR  60
VPLPVELAAE EPMFVNAKQY HAILRRRQIR AKLEAQNKLV KARKPYLHES RHRHAMKRAR  120
GTGGRFLNTK QLEEQKQKQA SGGASCTKVL GKNTLLQDSP AFAPSASAPA NVSSFSTISM  180
LANQERTCFP SVGFRPTVSF SALNGNGKLA TNGMHQRASM MR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111120RHRHAMKRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.14e-40NF-YA family protein