PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG021900.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 303aa    MW: 33118.2 Da    PI: 10.1061
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG021900.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.34.4e-32151207158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep++VNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh+hA++R+Rg+gGrF
  TRIDC2AG021900.2 151 EEPMFVNAKQYHAILRRRQIRAKLEAQNKL-VKARKPYLHESRHRHAMKRARGTGGRF 207
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MCKMEDHPGH PISNYDFLSG NGVHTNKLVH KNYDRDSSSA KSGRSQQEAS ATSDSGLNEQ  60
HTSRPSSQSD NDNDHGKPDQ HMVKPLLSLG NPETVAPPPM LDCSQSFAYI PYTADAYAGI  120
FPGYALHAIV HPQLNAATNS RVPLPVELAA EEPMFVNAKQ YHAILRRRQI RAKLEAQNKL  180
VKARKPYLHE SRHRHAMKRA RGTGGRFLNT KQLEEQKQKQ ASGGASCTKV LGKNTLLQDS  240
PAFAPSASAP ANVSSFSTIS MLANQERTCF PSVGFRPTVS FSALNGNGKL ATNGMHQRAS  300
MMR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192201RHRHAMKRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.18e-41NF-YA family protein