PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG021390.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 645aa MW: 74748.9 Da PI: 7.7501

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG021390.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.9	2.6e-26	48	135	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrks+s+ks++n ++ rtfvCs+eg+++++k+ +++++r tr+gC a+l +k + + k++vt+++ eHnH+lap TRIDC2AG021390.6 48 EFYNKYAGHVGFSVRKSTSHKSSENI-TKVRTFVCSREGYNRDKKSL--EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKAEHNHQLAP 135 6*******************6666.899*********9988..99***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
LQRLWHRLQE EGKMRRMIEA EPPIDEASLA KLVPEVDMEF ESEEKAYEFY NKYAGHVGFS 60 VRKSTSHKSS ENITKVRTFV CSREGYNRDK KSLEAKKPRL DTRIGCPARL IIKVTPECKY 120 RVTDFKAEHN HQLAPPSTMH MLRSQRILTE LQSGEAELSD DSVVTPTTKA TGDLVVRQVG 180 FLRSISLLPA DYKNYLRSKR TKAMQPGDGG AILKYLQTMQ MDNPSFFYTM QIDEDDKLTN 240 FFWADPKSRE DFTYFNDVLC VDTTYKINGY GRPLALFLGV NHHRQTIIFG AAMLYDESFE 300 SYKWLFESFK IAMHGKEPAV ALIDQSIQLS SAMAAAWPNT AQRVCAWHIY QNSVKHLNQV 360 FQGSKTFAKD FSKCVFGYEE EEEFVFAWRS MLEKYDLRHN EWLSKLFEER ERWALAYDRH 420 IFCADIISSL QAESFSSILK KFLSPQLDLL SFFKHYERAV DEHRYAELQA DFQASQSYPR 480 IPPAKMLKQT SHTYTPVVFE IFRKEFELFM DSVLFTCGEA GTTSDYKVAP SEKPKEHFVR 540 FNSSDNSCMC TCKKFEFMGI SCCHMLKVLD YRNIKELPQI YLLKRWRRTA KSTDEDSQGH 600 AANDNRSSLN VSVPSANHHG LQSINARIQD TSLSNMHENP FHRSS

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

LQRLWHRLQE EGKMRRMIEA EPPIDEASLA KLVPEVDMEF ESEEKAYEFY NKYAGHVGFS  60
VRKSTSHKSS ENITKVRTFV CSREGYNRDK KSLEAKKPRL DTRIGCPARL IIKVTPECKY  120
RVTDFKAEHN HQLAPPSTMH MLRSQRILTE LQSGEAELSD DSVVTPTTKA TGDLVVRQVG  180
FLRSISLLPA DYKNYLRSKR TKAMQPGDGG AILKYLQTMQ MDNPSFFYTM QIDEDDKLTN  240
FFWADPKSRE DFTYFNDVLC VDTTYKINGY GRPLALFLGV NHHRQTIIFG AAMLYDESFE  300
SYKWLFESFK IAMHGKEPAV ALIDQSIQLS SAMAAAWPNT AQRVCAWHIY QNSVKHLNQV  360
FQGSKTFAKD FSKCVFGYEE EEEFVFAWRS MLEKYDLRHN EWLSKLFEER ERWALAYDRH  420
IFCADIISSL QAESFSSILK KFLSPQLDLL SFFKHYERAV DEHRYAELQA DFQASQSYPR  480
IPPAKMLKQT SHTYTPVVFE IFRKEFELFM DSVLFTCGEA GTTSDYKVAP SEKPKEHFVR  540
FNSSDNSCMC TCKKFEFMGI SCCHMLKVLD YRNIKELPQI YLLKRWRRTA KSTDEDSQGH  600
AANDNRSSLN VSVPSANHHG LQSINARIQD TSLSNMHENP FHRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-120	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG021390.6