PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG021390.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 632aa MW: 73074 Da PI: 7.5983

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG021390.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.9	2.5e-26	35	122	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrks+s+ks++n ++ rtfvCs+eg+++++k+ +++++r tr+gC a+l +k + + k++vt+++ eHnH+lap TRIDC2AG021390.5 35 EFYNKYAGHVGFSVRKSTSHKSSENI-TKVRTFVCSREGYNRDKKSL--EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKAEHNHQLAP 122 6*******************6666.899*********9988..99***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MRRMIEAEPP IDEASLAKLV PEVDMEFESE EKAYEFYNKY AGHVGFSVRK STSHKSSENI 60 TKVRTFVCSR EGYNRDKKSL EAKKPRLDTR IGCPARLIIK VTPECKYRVT DFKAEHNHQL 120 APPSTMHMLR SQRILTELQS GEAELSDDSV VTPTTKATGD LVVRQVGFLR SISLLPADYK 180 NYLRSKRTKA MQPGDGGAIL KYLQTMQMDN PSFFYTMQID EDDKLTNFFW ADPKSREDFT 240 YFNDVLCVDT TYKINGYGRP LALFLGVNHH RQTIIFGAAM LYDESFESYK WLFESFKIAM 300 HGKEPAVALI DQSIQLSSAM AAAWPNTAQR VCAWHIYQNS VKHLNQVFQG SKTFAKDFSK 360 CVFGYEEEEE FVFAWRSMLE KYDLRHNEWL SKLFEERERW ALAYDRHIFC ADIISSLQAE 420 SFSSILKKFL SPQLDLLSFF KHYERAVDEH RYAELQADFQ ASQSYPRIPP AKMLKQTSHT 480 YTPVVFEIFR KEFELFMDSV LFTCGEAGTT SDYKVAPSEK PKEHFVRFNS SDNSCMCTCK 540 KFEFMGISCC HMLKVLDYRN IKELPQIYLL KRWRRTAKST DEDSQGHAAN DNRSSLNVSV 600 PSANHHGLQS INARIQDTSL SNMHENPFHR SS

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MRRMIEAEPP IDEASLAKLV PEVDMEFESE EKAYEFYNKY AGHVGFSVRK STSHKSSENI  60
TKVRTFVCSR EGYNRDKKSL EAKKPRLDTR IGCPARLIIK VTPECKYRVT DFKAEHNHQL  120
APPSTMHMLR SQRILTELQS GEAELSDDSV VTPTTKATGD LVVRQVGFLR SISLLPADYK  180
NYLRSKRTKA MQPGDGGAIL KYLQTMQMDN PSFFYTMQID EDDKLTNFFW ADPKSREDFT  240
YFNDVLCVDT TYKINGYGRP LALFLGVNHH RQTIIFGAAM LYDESFESYK WLFESFKIAM  300
HGKEPAVALI DQSIQLSSAM AAAWPNTAQR VCAWHIYQNS VKHLNQVFQG SKTFAKDFSK  360
CVFGYEEEEE FVFAWRSMLE KYDLRHNEWL SKLFEERERW ALAYDRHIFC ADIISSLQAE  420
SFSSILKKFL SPQLDLLSFF KHYERAVDEH RYAELQADFQ ASQSYPRIPP AKMLKQTSHT  480
YTPVVFEIFR KEFELFMDSV LFTCGEAGTT SDYKVAPSEK PKEHFVRFNS SDNSCMCTCK  540
KFEFMGISCC HMLKVLDYRN IKELPQIYLL KRWRRTAKST DEDSQGHAAN DNRSSLNVSV  600
PSANHHGLQS INARIQDTSL SNMHENPFHR SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-120	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG021390.5