PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG021390.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 766aa MW: 87578.6 Da PI: 8.0986

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG021390.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	43.2	5.5e-14	99	135	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C Cg + Tp++Rrgpdg++tLCnaCG+ yrk ++ TRIDC2AG021390.3 99 CLRCGISGnaTPHMRRGPDGPRTLCNACGIAYRKGKM 135 5667777777************************876 PP
2	FAR1	83.6	3.3e-26	169	256	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrks+s+ks++n ++ rtfvCs+eg+++++k+ +++++r tr+gC a+l +k + + k++vt+++ eHnH+lap TRIDC2AG021390.3 169 EFYNKYAGHVGFSVRKSTSHKSSENI-TKVRTFVCSREGYNRDKKSL--EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKAEHNHQLAP 256 6*******************6666.899*********9988..99***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
RRRIGSQHPL PIPTPLIRLA PNPSSDSCKP RDFPKFVRNF LPNHSPVLPK GGDAMMHMLV 60 ASDGGGGEMH PYAAVPAEQE LELHRDNAAD DSLDGHVRCL RCGISGNATP HMRRGPDGPR 120 TLCNACGIAY RKGKMRRMIE AEPPIDEASL AKLVPEVDME FESEEKAYEF YNKYAGHVGF 180 SVRKSTSHKS SENITKVRTF VCSREGYNRD KKSLEAKKPR LDTRIGCPAR LIIKVTPECK 240 YRVTDFKAEH NHQLAPPSTM HMLRSQRILT ELQSGEAELS DDSVVTPTTK ATGDLVVRQV 300 GFLRSISLLP ADYKNYLRSK RTKAMQPGDG GAILKYLQTM QMDNPSFFYT MQIDEDDKLT 360 NFFWADPKSR EDFTYFNDVL CVDTTYKING YGRPLALFLG VNHHRQTIIF GAAMLYDESF 420 ESYKWLFESF KIAMHGKEPA VALIDQSIQL SSAMAAAWPN TAQRVCAWHI YQNSVKHLNQ 480 VFQGSKTFAK DFSKCVFGYE EEEEFVFAWR SMLEKYDLRH NEWLSKLFEE RERWALAYDR 540 HIFCADIISS LQAESFSSIL KKFLSPQLDL LSFFKHYERA VDEHRYAELQ ADFQASQSYP 600 RIPPAKMLKQ TSHTYTPVVF EIFRKEFELF MDSVLFTCGE AGTTSDYKVA PSEKPKEHFV 660 RFNSSDNSCM CTCKKFEFMG ISCCHMLKVL DYRNIKELPQ IYLLKRWRRT AKSTDEDSQG 720 HAANDNRSSL NVSVPSANHH GLQSINARIQ DTSLSNMHEN PFHRSS

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

RRRIGSQHPL PIPTPLIRLA PNPSSDSCKP RDFPKFVRNF LPNHSPVLPK GGDAMMHMLV  60
ASDGGGGEMH PYAAVPAEQE LELHRDNAAD DSLDGHVRCL RCGISGNATP HMRRGPDGPR  120
TLCNACGIAY RKGKMRRMIE AEPPIDEASL AKLVPEVDME FESEEKAYEF YNKYAGHVGF  180
SVRKSTSHKS SENITKVRTF VCSREGYNRD KKSLEAKKPR LDTRIGCPAR LIIKVTPECK  240
YRVTDFKAEH NHQLAPPSTM HMLRSQRILT ELQSGEAELS DDSVVTPTTK ATGDLVVRQV  300
GFLRSISLLP ADYKNYLRSK RTKAMQPGDG GAILKYLQTM QMDNPSFFYT MQIDEDDKLT  360
NFFWADPKSR EDFTYFNDVL CVDTTYKING YGRPLALFLG VNHHRQTIIF GAAMLYDESF  420
ESYKWLFESF KIAMHGKEPA VALIDQSIQL SSAMAAAWPN TAQRVCAWHI YQNSVKHLNQ  480
VFQGSKTFAK DFSKCVFGYE EEEEFVFAWR SMLEKYDLRH NEWLSKLFEE RERWALAYDR  540
HIFCADIISS LQAESFSSIL KKFLSPQLDL LSFFKHYERA VDEHRYAELQ ADFQASQSYP  600
RIPPAKMLKQ TSHTYTPVVF EIFRKEFELF MDSVLFTCGE AGTTSDYKVA PSEKPKEHFV  660
RFNSSDNSCM CTCKKFEFMG ISCCHMLKVL DYRNIKELPQ IYLLKRWRRT AKSTDEDSQG  720
HAANDNRSSL NVSVPSANHH GLQSINARIQ DTSLSNMHEN PFHRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-118	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG021390.3