PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG021390.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 704aa MW: 80773.8 Da PI: 8.1131

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG021390.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.7	2.9e-26	107	194	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrks+s+ks++n ++ rtfvCs+eg+++++k+ +++++r tr+gC a+l +k + + k++vt+++ eHnH+lap TRIDC2AG021390.2 107 EFYNKYAGHVGFSVRKSTSHKSSENI-TKVRTFVCSREGYNRDKKSL--EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKAEHNHQLAP 194 6*******************6666.899*********9988..99***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MEAEGRCTRT PPCRRSRSWS STATTPPTTA STATSGACDA VYRVMRHPIC DVALMARELF 60 ATLVASLTGR GKMRRMIEAE PPIDEASLAK LVPEVDMEFE SEEKAYEFYN KYAGHVGFSV 120 RKSTSHKSSE NITKVRTFVC SREGYNRDKK SLEAKKPRLD TRIGCPARLI IKVTPECKYR 180 VTDFKAEHNH QLAPPSTMHM LRSQRILTEL QSGEAELSDD SVVTPTTKAT GDLVVRQVGF 240 LRSISLLPAD YKNYLRSKRT KAMQPGDGGA ILKYLQTMQM DNPSFFYTMQ IDEDDKLTNF 300 FWADPKSRED FTYFNDVLCV DTTYKINGYG RPLALFLGVN HHRQTIIFGA AMLYDESFES 360 YKWLFESFKI AMHGKEPAVA LIDQSIQLSS AMAAAWPNTA QRVCAWHIYQ NSVKHLNQVF 420 QGSKTFAKDF SKCVFGYEEE EEFVFAWRSM LEKYDLRHNE WLSKLFEERE RWALAYDRHI 480 FCADIISSLQ AESFSSILKK FLSPQLDLLS FFKHYERAVD EHRYAELQAD FQASQSYPRI 540 PPAKMLKQTS HTYTPVVFEI FRKEFELFMD SVLFTCGEAG TTSDYKVAPS EKPKEHFVRF 600 NSSDNSCMCT CKKFEFMGIS CCHMLKVLDY RNIKELPQIY LLKRWRRTAK STDEDSQGHA 660 ANDNRSSLNV SVPSANHHGL QSINARIQDT SLSNMHENPF HRSS

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MEAEGRCTRT PPCRRSRSWS STATTPPTTA STATSGACDA VYRVMRHPIC DVALMARELF  60
ATLVASLTGR GKMRRMIEAE PPIDEASLAK LVPEVDMEFE SEEKAYEFYN KYAGHVGFSV  120
RKSTSHKSSE NITKVRTFVC SREGYNRDKK SLEAKKPRLD TRIGCPARLI IKVTPECKYR  180
VTDFKAEHNH QLAPPSTMHM LRSQRILTEL QSGEAELSDD SVVTPTTKAT GDLVVRQVGF  240
LRSISLLPAD YKNYLRSKRT KAMQPGDGGA ILKYLQTMQM DNPSFFYTMQ IDEDDKLTNF  300
FWADPKSRED FTYFNDVLCV DTTYKINGYG RPLALFLGVN HHRQTIIFGA AMLYDESFES  360
YKWLFESFKI AMHGKEPAVA LIDQSIQLSS AMAAAWPNTA QRVCAWHIYQ NSVKHLNQVF  420
QGSKTFAKDF SKCVFGYEEE EEFVFAWRSM LEKYDLRHNE WLSKLFEERE RWALAYDRHI  480
FCADIISSLQ AESFSSILKK FLSPQLDLLS FFKHYERAVD EHRYAELQAD FQASQSYPRI  540
PPAKMLKQTS HTYTPVVFEI FRKEFELFMD SVLFTCGEAG TTSDYKVAPS EKPKEHFVRF  600
NSSDNSCMCT CKKFEFMGIS CCHMLKVLDY RNIKELPQIY LLKRWRRTAK STDEDSQGHA  660
ANDNRSSLNV SVPSANHHGL QSINARIQDT SLSNMHENPF HRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-119	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG021390.2