PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG019880.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 733aa MW: 79914.6 Da PI: 4.7377

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG019880.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.1	2e-13	5	49	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W+++Ed+ l ++ +G+++W+ Ia + +t+ qc+ rw++yl TRIDC2AG019880.3 5 SWSAQEDDVLRAQIAHHGTDNWTVIATQFK-DKTARQCRRRWYNYL 49 6**************************9.************7 PP
2	Myb_DNA-binding	41.2	3.9e-13	55	98	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2AG019880.3 55 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 98 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
RHIVSWSAQE DDVLRAQIAH HGTDNWTVIA TQFKDKTARQ CRRRWYNYLN TECKKGGWSR 60 EEDMLLCEAQ KLLGNKWTEI AKVVSGRTDN AVKNRFSTLC KRRAKDDELF EENGTVCSNA 120 SAKRVLTQSG GVTCAAPGSS PPIKNMSSCK PDFKENIAPN MKSFAQQKSI QQDSRQPLAS 180 ICPDNQSVNI VKTQSLVTKT STKQLHGEEQ SCVKHEGNFL KRNDPKLATL LQQADLLSSL 240 ATKVNTENTS QSMDEAWQKL QHHLVKKDDN DMSESSMSGT ASLLDDLDDL IVDPYENEEE 300 DEQKSREQNG ATSQMAPDQI MDNCPVDQIA EESSLCGNTL SSTMEPCPVA EILAHINLGE 360 AAEDMGLHFM EYSSPTRAAQ AQQAKADAEI PASVDLSESA EGSWSQFMEY TSPAHTVLHA 420 NSSPAHTVQA EQAKADAEIP VSVDLSEAAE GSWSQFMEYT SPAHTVLHAE GDAETPASVK 480 LREAAEGSLP QCMEHMSPAH TLLRAKRDSE IPASANSNEA AEGSWSQFME YMSPAHIVLH 540 AKADAETPAS VNLGEAAEGS LPQCMEPMSP AHTLLRAKTD YEIPASANLS EAAKYDSLQC 600 TECTSPARAD LQAKADEEIS ENFSEVAQDS RLQCAKFTSL AHTASKGKAV AKKGTSENCS 660 DVPEDSSTQP CMEFTSPAHT VPTFHPFTDN VPTPKITASE RNFLLSVLEL ASPGSKPETS 720 QQPSCKRALL NSL

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

RHIVSWSAQE DDVLRAQIAH HGTDNWTVIA TQFKDKTARQ CRRRWYNYLN TECKKGGWSR  60
EEDMLLCEAQ KLLGNKWTEI AKVVSGRTDN AVKNRFSTLC KRRAKDDELF EENGTVCSNA  120
SAKRVLTQSG GVTCAAPGSS PPIKNMSSCK PDFKENIAPN MKSFAQQKSI QQDSRQPLAS  180
ICPDNQSVNI VKTQSLVTKT STKQLHGEEQ SCVKHEGNFL KRNDPKLATL LQQADLLSSL  240
ATKVNTENTS QSMDEAWQKL QHHLVKKDDN DMSESSMSGT ASLLDDLDDL IVDPYENEEE  300
DEQKSREQNG ATSQMAPDQI MDNCPVDQIA EESSLCGNTL SSTMEPCPVA EILAHINLGE  360
AAEDMGLHFM EYSSPTRAAQ AQQAKADAEI PASVDLSESA EGSWSQFMEY TSPAHTVLHA  420
NSSPAHTVQA EQAKADAEIP VSVDLSEAAE GSWSQFMEYT SPAHTVLHAE GDAETPASVK  480
LREAAEGSLP QCMEHMSPAH TLLRAKRDSE IPASANSNEA AEGSWSQFME YMSPAHIVLH  540
AKADAETPAS VNLGEAAEGS LPQCMEPMSP AHTLLRAKTD YEIPASANLS EAAKYDSLQC  600
TECTSPARAD LQAKADEEIS ENFSEVAQDS RLQCAKFTSL AHTASKGKAV AKKGTSENCS  660
DVPEDSSTQP CMEFTSPAHT VPTFHPFTDN VPTPKITASE RNFLLSVLEL ASPGSKPETS  720
QQPSCKRALL NSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	3e-69	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG019880.3