PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG019880.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 374aa    MW: 41242.8 Da    PI: 4.5184
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG019880.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-131457146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                       +g W+ eEd ll +a k+lG++ W+ Ia+ +  gRt++ +k+r+ +
  TRIDC2AG019880.13 14 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 57
                       688*******************.*********.**********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
ECRWYNYLNT ECKKGGWSRE EDMLLCEAQK LLGNKWTEIA KVVSGRTDNA VKNRFSTLCK  60
RRAKDDELFE ENGTVCSNAS AKRVLTQSGG VTCAAPGSSP PIKNMSSCKP DFKENIAPNM  120
KSFAQQKSIQ QDSRQPLASI CPDNQSVNIV KTQSLVTKTS TKQLHGEEQS CVKHEGNFLK  180
RNDPKLATLL QQADLLSSLA TKVNTENTSQ SMDEAWQKLQ HHLVKKDDND MSESSMSGTA  240
SLLDDLDDLI VDPYENEEED EQKSREQNGA TSQMAPDQIM DNCPVDQIAE ESSLCGNTLS  300
STMEPCPVAE ILAHINLGEA AEDMGLHFME YSSPTRAAQA QQAKADAEIP ASVDLSESAE  360
GSWSQFMEYT SPAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02820.13e-47MYB family protein