PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG018340.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 311aa    MW: 34366.9 Da    PI: 8.2078
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG018340.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1124.1e-35481402103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+ +++++sw e+  +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg k+ll
  TRIDC2AG018340.2  48 FLTKTYQLVDDPCTDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANEFFRKGAKHLL 131
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                        +i+r+ks+
  TRIDC2AG018340.2 132 AEIHRRKSS 140
                       ******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
RGVRVVVRAM AFLVERCGEM VVSMEMGSGA AGAHGAGGVA GKPVPAPFLT KTYQLVDDPC  60
TDHIVSWGED DATFVVWRPP EFARDLLPNY FKHNNFSSFV RQLNTYGFRK IVADRWEFAN  120
EFFRKGAKHL LAEIHRRKSS QPPPPSMVPH QAAYHHHYHL GNTFSPPPPP PPAAHHHHHP  180
GNGGGDFLAA LSEDNRQLRR RNSLLLSELA HMKKLYNDII YFLQNHVAPV TSPSSAALQR  240
HPPLPGAGAG VAASNSCRLL ELDMDVDRDS PAAEEDDTVK LFGVALHHGK KKRAHREERG  300
DVVAHDLGSE V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.18e-76HSF family protein