PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG015380.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 221aa    MW: 25109.5 Da    PI: 10.4196
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG015380.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.94.7e-152375557
                      SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
          Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                      t+ ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++
  TRIDC2AG015380.9 23 TKKSPLQIQMLESFYSEVQYPKPEDVTEYAASVGLTYNQVRIWFKERRRKERR 75
                      566899*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
SPCTAACQMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV QYPKPEDVTE YAASVGLTYN  60
QVRIWFKERR RKERRHMEAA EVHMETQASA RSNWPRCSSS RSSNSSQSPM QDTTGHQSYQ  120
DQSVLKKRKI MSPTAQRSTL PFENNDPVRK HGKGKGLMTV WHAMYSQTAE IQDCSSFIDE  180
SGCLRSLRPF EDCGGKLAQR QTLPRKKVNK KSRPPPSKRK V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126155KKRKIMSPTAQRSTLPFENNDPVRKHGKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12750.12e-09HB-other family protein