PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC2AG012580.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 825aa MW: 91839.1 Da PI: 6.3662

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG012580.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	4.9e-19	238	337	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kvl+ sd+++ grlvlpk +ae++ ++++e++ lt++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ + TRIDC2AG012580.3 238 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGRPLTIQDAKGKEWHFQFRFwpNNNSRMYVLE-GVTPCIQSLQLQAGDTVTFSRIE-PG 328 99************************555567778***********99899999999.*******************887.77 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++lv+++++ TRIDC2AG012580.3 329 GKLVMGFRK 337 777877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 825 aa Download sequence
MRELHEESRT STWFRVKWLQ SFFYLLQITR DSLVKAMNCC QNLEIGQSSN ILRQKEIENG 60 ARQIKWEQPT LSIGDMGRMP FLIRPQSALE SPQSQCTRRD DNRDPTADST TSESISEAGL 120 SMSLGIANNG NKMEATSTME RPMVSPTTPF SEGRELATTL SPFQHAQRAR HFLTRPPRVA 180 EGAAFDPMRD GFPHLRVARP PAEGRGRNQL LPRYWPRITD QELQQISGDS NSTIVPLFEK 240 VLSASDAGRI GRLVLPKACA EAYFPPISQP EGRPLTIQDA KGKEWHFQFR FWPNNNSRMY 300 VLEGVTPCIQ SLQLQAGDTV TFSRIEPGGK LVMGFRKATN TVSLPDSQIS AIATGSLLGD 360 SFFSNTNENL SIVSGYSGFL QSMKGAADLQ PSSLFDHHAN SADGDVSWLK ADRFGGRPDE 420 GSFQFLHKRS RSIGSKSRRL LMDNEEALEL KLSWEEAQEL LRPAPSAKPT VVMIEDYEFE 480 EYDEPPVFAK RSIFTSRSTG EQDQWIQCDD CSKWRRLPLN VIIASKWRCA DNTWDPKSCS 540 CSAPEELAHK ELQSILQQYE EIRRRKSNYF LKQSIPEMDA SSLDALATAA VFGEVGNQGA 600 ASVATTTKHP RHRPGCTCIV CIQPPSGKGP KHNPACTCNV CMTVRRRFKT LMMRKKQRQS 660 EREEAEASKR IAWVGRDEPE GSNLSRSPQT VDTARDCDVI MFDKADANKG HIDLNFHPAS 720 REEEQQHGGQ PRVSMVSLLE VANRPLESYM KQNGLVSLAA EQGSSSGTAT VPSQPAPMES 780 EERPSDEGRA VAVEQEREPV DNMAVDEAAC ENQGNAASAS DIAAT

Sequence ? help Back to Top

Protein Sequence Length: 825 aa Download sequence

MRELHEESRT STWFRVKWLQ SFFYLLQITR DSLVKAMNCC QNLEIGQSSN ILRQKEIENG  60
ARQIKWEQPT LSIGDMGRMP FLIRPQSALE SPQSQCTRRD DNRDPTADST TSESISEAGL  120
SMSLGIANNG NKMEATSTME RPMVSPTTPF SEGRELATTL SPFQHAQRAR HFLTRPPRVA  180
EGAAFDPMRD GFPHLRVARP PAEGRGRNQL LPRYWPRITD QELQQISGDS NSTIVPLFEK  240
VLSASDAGRI GRLVLPKACA EAYFPPISQP EGRPLTIQDA KGKEWHFQFR FWPNNNSRMY  300
VLEGVTPCIQ SLQLQAGDTV TFSRIEPGGK LVMGFRKATN TVSLPDSQIS AIATGSLLGD  360
SFFSNTNENL SIVSGYSGFL QSMKGAADLQ PSSLFDHHAN SADGDVSWLK ADRFGGRPDE  420
GSFQFLHKRS RSIGSKSRRL LMDNEEALEL KLSWEEAQEL LRPAPSAKPT VVMIEDYEFE  480
EYDEPPVFAK RSIFTSRSTG EQDQWIQCDD CSKWRRLPLN VIIASKWRCA DNTWDPKSCS  540
CSAPEELAHK ELQSILQQYE EIRRRKSNYF LKQSIPEMDA SSLDALATAA VFGEVGNQGA  600
ASVATTTKHP RHRPGCTCIV CIQPPSGKGP KHNPACTCNV CMTVRRRFKT LMMRKKQRQS  660
EREEAEASKR IAWVGRDEPE GSNLSRSPQT VDTARDCDVI MFDKADANKG HIDLNFHPAS  720
REEEQQHGGQ PRVSMVSLLE VANRPLESYM KQNGLVSLAA EQGSSSGTAT VPSQPAPMES  780
EERPSDEGRA VAVEQEREPV DNMAVDEAAC ENQGNAASAS DIAAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	645	656	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-170	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG012580.3