PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG012580.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 923aa MW: 102070 Da PI: 6.6447

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG012580.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.8e-19	336	435	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kvl+ sd+++ grlvlpk +ae++ ++++e++ lt++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ + TRIDC2AG012580.2 336 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGRPLTIQDAKGKEWHFQFRFwpNNNSRMYVLE-GVTPCIQSLQLQAGDTVTFSRIE-PG 426 99************************555567778***********99899999999.*******************887.77 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++lv+++++ TRIDC2AG012580.2 427 GKLVMGFRK 435 777877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 923 aa Download sequence
RKGWPLRSGG FAVLCDKCGL AFEQLVFCDI FHQKESGWRD CSFCGKRLHC GCVASKNSFD 60 LLDSGGVQCV NCMKNPGPQP VSCQVAPKLF LPPPNNQRLF GKSDELLPGR PLESPSLMLD 120 SRSDDIAIIT KSNHPFMVKN LEIGQSSNIL RQKEIENGAR QIKWEQPTLS IGDMGRMPFL 180 IRPQSALESP QSQCTRRDDN RDPTADSTTS ESISEAGLSM SLGIANNGNK MEATSTMERP 240 MVSPTTPFSE GRELATTLSP FQHAQRARHF LTRPPRVAEG AAFDPMRDGF PHLRVARPPA 300 EGRGRNQLLP RYWPRITDQE LQQISGDSNS TIVPLFEKVL SASDAGRIGR LVLPKACAEA 360 YFPPISQPEG RPLTIQDAKG KEWHFQFRFW PNNNSRMYVL EGVTPCIQSL QLQAGDTVTF 420 SRIEPGGKLV MGFRKATNTV SLPDSQISAI ATGSLLGDSF FSNTNENLSI VSGYSGFLQS 480 MKGAADLQPS SLFDHHANSA DGDVSWLKAD RFGGRPDEGS FQFLHKRSRS IGSKSRRLLM 540 DNEEALELKL SWEEAQELLR PAPSAKPTVV MIEDYEFEEY DEPPVFAKRS IFTSRSTGEQ 600 DQWIQCDDCS KWRRLPLNVI IASKWRCADN TWDPKSCSCS APEELAHKEL QSILQQYEEI 660 RRRKSNYFLK QSIPEMDASS LDALATAAVF GEVGNQGAAS VATTTKHPRH RPGCTCIVCI 720 QPPSGKGPKH NPACTCNVCM TVRRRFKTLM MRKKQRQSER EEAEASKRIA WVGRDEPEGS 780 NLSRSPQTVD TARDCDVIMF DKADANKGHI DLNFHPASRE EEQQHGGQPR VSMVSLLEVA 840 NRPLESYMKQ NGLVSLAAEQ GSSSGTATVP SQPAPMESEE RPSDEGRAVA VEQEREPVDN 900 MAVDEAACEN QGNAASASDI AAT

Sequence ? help Back to Top

Protein Sequence Length: 923 aa Download sequence

RKGWPLRSGG FAVLCDKCGL AFEQLVFCDI FHQKESGWRD CSFCGKRLHC GCVASKNSFD  60
LLDSGGVQCV NCMKNPGPQP VSCQVAPKLF LPPPNNQRLF GKSDELLPGR PLESPSLMLD  120
SRSDDIAIIT KSNHPFMVKN LEIGQSSNIL RQKEIENGAR QIKWEQPTLS IGDMGRMPFL  180
IRPQSALESP QSQCTRRDDN RDPTADSTTS ESISEAGLSM SLGIANNGNK MEATSTMERP  240
MVSPTTPFSE GRELATTLSP FQHAQRARHF LTRPPRVAEG AAFDPMRDGF PHLRVARPPA  300
EGRGRNQLLP RYWPRITDQE LQQISGDSNS TIVPLFEKVL SASDAGRIGR LVLPKACAEA  360
YFPPISQPEG RPLTIQDAKG KEWHFQFRFW PNNNSRMYVL EGVTPCIQSL QLQAGDTVTF  420
SRIEPGGKLV MGFRKATNTV SLPDSQISAI ATGSLLGDSF FSNTNENLSI VSGYSGFLQS  480
MKGAADLQPS SLFDHHANSA DGDVSWLKAD RFGGRPDEGS FQFLHKRSRS IGSKSRRLLM  540
DNEEALELKL SWEEAQELLR PAPSAKPTVV MIEDYEFEEY DEPPVFAKRS IFTSRSTGEQ  600
DQWIQCDDCS KWRRLPLNVI IASKWRCADN TWDPKSCSCS APEELAHKEL QSILQQYEEI  660
RRRKSNYFLK QSIPEMDASS LDALATAAVF GEVGNQGAAS VATTTKHPRH RPGCTCIVCI  720
QPPSGKGPKH NPACTCNVCM TVRRRFKTLM MRKKQRQSER EEAEASKRIA WVGRDEPEGS  780
NLSRSPQTVD TARDCDVIMF DKADANKGHI DLNFHPASRE EEQQHGGQPR VSMVSLLEVA  840
NRPLESYMKQ NGLVSLAAEQ GSSSGTATVP SQPAPMESEE RPSDEGRAVA VEQEREPVDN  900
MAVDEAACEN QGNAASASDI AAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	743	754	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-168	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG012580.2