PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG012470.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 330aa    MW: 37635.8 Da    PI: 8.1518
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG012470.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.31.1e-1265144190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e GF +r  ks+ +  n++  +++ vC + gk+  e+++         + r++C a +++ ++kd+ w++++ +  HnH+l+
  TRIDC2AG012470.6  65 DFYNLYSWEKGFGIRYGKSRLN-VNRTKCMQEIVCGCAGKPIVENTR---------SCRCECPALMRLLRSKDNGWYIAEHRDVHNHALT 144
                       6*****************9998.555578899*******99887555.........99******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
HALNDSVTIK LSRVRVGAAA EGRAPCSDRV TALEKTVREF AETPGDIVIV PKIGTSFDSL  60
GEAYDFYNLY SWEKGFGIRY GKSRLNVNRT KCMQEIVCGC AGKPIVENTR SCRCECPALM  120
RLLRSKDNGW YIAEHRDVHN HALTQTYGQT IHWPSHKHID VYSRDLVKQL RQNNVSLAKV  180
YSIIGSFFGR MENVPFTKRA LRNLCGKISH EQSEDDVRKT MEVFQELCSK DPQFTYRVQA  240
DSEGRISNLM WATGNSRLQY NFFGDVVTFD TTYRTNLYDM PFGLFVGVNS HFQIIILAGV  300
LVKHETVETF EWVFSEFVRI MGGAANNPDW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.14e-37FAR1 family protein