PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG012470.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 398aa MW: 44887.8 Da PI: 6.0169

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG012470.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.4	9.8e-13	134	213	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e GF +r ks+ + n++ +++ vC + gk+ e+++ + r++C a +++ ++kd+ w++++ + HnH+l+ TRIDC2AG012470.2 134 DFYNLYSWEKGFGIRYGKSRLN-VNRTKCMQEIVCGCAGKPIVENTR---------SCRCECPALMRLLRSKDNGWYIAEHRDVHNHALT 213 6***************9998.555578899***99887555.........99****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEFLLQPINR TLLEEVNDNN SAMEPVRFPV AAAAEVEPPA PAASSADAQI CLPETEAADM 60 PQCSEHSIEQ MDPKAPGWTQ SRVRVGAAAE GRAPCSDRVT ALEKTVREFA ETPGDIVIVP 120 KIGTSFDSLG EAYDFYNLYS WEKGFGIRYG KSRLNVNRTK CMQEIVCGCA GKPIVENTRS 180 CRCECPALMR LLRSKDNGWY IAEHRDVHNH ALTQTYGQTI HWPSHKHIDV YSRDLVKQLR 240 QNNVSLAKVY SIIGSFFGRM ENVPFTKRAL RNLCGKISHE QSEDDVRKTM EVFQELCSKD 300 PQFTYRVQAD SEGRISNLMW ATGNSRLQYN FFGDVVTFDT TYRTNLYDMP FGLFVGVNSH 360 FQIIILAGVL VKHETVETFE WVFSEFVRIM GGAANNPD

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEFLLQPINR TLLEEVNDNN SAMEPVRFPV AAAAEVEPPA PAASSADAQI CLPETEAADM  60
PQCSEHSIEQ MDPKAPGWTQ SRVRVGAAAE GRAPCSDRVT ALEKTVREFA ETPGDIVIVP  120
KIGTSFDSLG EAYDFYNLYS WEKGFGIRYG KSRLNVNRTK CMQEIVCGCA GKPIVENTRS  180
CRCECPALMR LLRSKDNGWY IAEHRDVHNH ALTQTYGQTI HWPSHKHIDV YSRDLVKQLR  240
QNNVSLAKVY SIIGSFFGRM ENVPFTKRAL RNLCGKISHE QSEDDVRKTM EVFQELCSKD  300
PQFTYRVQAD SEGRISNLMW ATGNSRLQYN FFGDVVTFDT TYRTNLYDMP FGLFVGVNSH  360
FQIIILAGVL VKHETVETFE WVFSEFVRIM GGAANNPD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-36	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG012470.2