PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG012060.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 356aa MW: 38339.9 Da PI: 7.0323

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG012060.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.5	4.4e-52	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+ +yL++++++ ++++ ++i++vdiyk++PwdLp+++ ++ ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++ TRIDC2AG012060.1 15 LPPGFRFHPTDEELILHYLRNRAAAAPCPV-SIIADVDIYKFDPWDLPSQAVYGDCEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIH 106 79**************************.89***********76667789*********************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +g+ vg+kk Lvfykgr pkg+kt W+mheyrl TRIDC2AG012060.1 107 DPaTGQGVGVKKALVFYKGRPPKGTKTAWIMHEYRL 142 978888**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MAMAQGQGQG AATSLPPGFR FHPTDEELIL HYLRNRAAAA PCPVSIIADV DIYKFDPWDL 60 PSQAVYGDCE WYFFSPRDRK YPNGIRPNRA AGSGYWKATG TDKPIHDPAT GQGVGVKKAL 120 VFYKGRPPKG TKTAWIMHEY RLAADPLTTA VNTYKPIKFR NVSMRLDDWV LCRIYKKTGL 180 ASPMVPPLSD YDHMADHDDL SGGGSTFDDA ACSFYAHSSS SSSASRTMIT QQPPHAGGLP 240 TIPSFSELFD DYSLAQILDA EAEHGATHHL AVHPSLNMLL PVGDNAHGVQ PSYYAPSSSP 300 DASGGSAGKR KAASPEESSA KRLNGSCFDA PPQSANSWQG AASVLGGLGH QMLPQF

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MAMAQGQGQG AATSLPPGFR FHPTDEELIL HYLRNRAAAA PCPVSIIADV DIYKFDPWDL  60
PSQAVYGDCE WYFFSPRDRK YPNGIRPNRA AGSGYWKATG TDKPIHDPAT GQGVGVKKAL  120
VFYKGRPPKG TKTAWIMHEY RLAADPLTTA VNTYKPIKFR NVSMRLDDWV LCRIYKKTGL  180
ASPMVPPLSD YDHMADHDDL SGGGSTFDDA ACSFYAHSSS SSSASRTMIT QQPPHAGGLP  240
TIPSFSELFD DYSLAQILDA EAEHGATHHL AVHPSLNMLL PVGDNAHGVQ PSYYAPSSSP  300
DASGGSAGKR KAASPEESSA KRLNGSCFDA PPQSANSWQG AASVLGGLGH QMLPQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	2e-82	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG012060.1