PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG011960.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 354aa    MW: 39138.4 Da    PI: 7.9347
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG011960.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.94.2e-49682281129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..............................kvkaeekewyfFsk 63 
                       lppGfrFhPtdee+v++yL++k+ ++ +++  vi++vd++k+ePwdLp                               k+k +ekewyfF++
  TRIDC2AG011960.3  68 LPPGFRFHPTDEEVVTHYLTPKAVNNAFSC-LVIADVDLNKTEPWDLPGeyyysssrreerpfgsicsslmaggsfcagKAKMGEKEWYFFVH 159
                       79**************************99.78***************5589**********************99998778899******** PP

               NAM  64 rdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +d+ky+tg+r+nrat++gyWkatgkdke+++    +  lvg+kktLvfy+grap+g kt  vmheyrle
  TRIDC2AG011960.3 160 KDRKYPTGTRTNRATEKGYWKATGKDKEIFRGkgrDAVLVGMKKTLVFYTGRAPRGDKTPYVMHEYRLE 228
                       ******************************984444445****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
SSPKRPINHR KSSLHISPAL LPPPTLPCHL VLLPQIAKKA SRSGREGAAM SDVTAVMDLE  60
VEEPRLSLPP GFRFHPTDEE VVTHYLTPKA VNNAFSCLVI ADVDLNKTEP WDLPGEYYYS  120
SSRREERPFG SICSSLMAGG SFCAGKAKMG EKEWYFFVHK DRKYPTGTRT NRATEKGYWK  180
ATGKDKEIFR GKGRDAVLVG MKKTLVFYTG RAPRGDKTPY VMHEYRLEGQ LPHRLPRSAR  240
NDWAVCRVFD KDLAAKNAPP QTASAAVGVM EDPYAFLDVD DFFNNPDLPM LMDSPSGADD  300
FAGASSSTSS AAVPLEPDME HLSIKTEPPV PQQQMQSPNY FFMPATTANG NHGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.12e-75NAC family protein