PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG011890.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 357aa MW: 39290.6 Da PI: 4.7968

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG011890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.9	1.9e-53	22	152	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhP dee+v++yL++kv ++++++ +vi++vd++k+ePwdLp k+k +ekew+fF+++ +ky+tg+r+nrat++gyWkatgkdke++ TRIDC2AG011890.1 22 LPPGFRFHPIDEEVVTHYLTRKVLRESFSC-QVIADVDLNKTEPWDLPGKAKMGEKEWFFFVHKGRKYPTGTRTNRATEKGYWKATGKDKEIF 113 79**************************.99***********99999************************************ PP NAM 94 sk...kgelvglkktLvfykgrapkgektdWvmheyrle 129 + + lvg+kktLvfy+grap+g kt Wvmheyrle TRIDC2AG011890.1 114 RGkgrDAVLVGMKKTLVFYTGRAPSGGKTPWVMHEYRLE 152 984444445**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
AAAMSDVTAV MDLEVEEPKL ALPPGFRFHP IDEEVVTHYL TRKVLRESFS CQVIADVDLN 60 KTEPWDLPGK AKMGEKEWFF FVHKGRKYPT GTRTNRATEK GYWKATGKDK EIFRGKGRDA 120 VLVGMKKTLV FYTGRAPSGG KTPWVMHEYR LEGELPHRLP RTAKDDWAVC RVFNKDLAAK 180 NAPQMAPAAG GAMEDPLAFL DDLLIDTDLN LFDDADLPML MDSPSGADDF AGASSSTSSA 240 ALPLEPDAEH LTIKMEPPPQ QQQQMQSPDY FMPATANGNL GGAGYSTYQA VVDQQAAIRM 300 YCKPKAEVSS SSALGLDMGA LAGADTSFLM PSSRSCLDLE ELFRGEALMD YSDMWKI

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

AAAMSDVTAV MDLEVEEPKL ALPPGFRFHP IDEEVVTHYL TRKVLRESFS CQVIADVDLN  60
KTEPWDLPGK AKMGEKEWFF FVHKGRKYPT GTRTNRATEK GYWKATGKDK EIFRGKGRDA  120
VLVGMKKTLV FYTGRAPSGG KTPWVMHEYR LEGELPHRLP RTAKDDWAVC RVFNKDLAAK  180
NAPQMAPAAG GAMEDPLAFL DDLLIDTDLN LFDDADLPML MDSPSGADDF AGASSSTSSA  240
ALPLEPDAEH LTIKMEPPPQ QQQQMQSPDY FMPATANGNL GGAGYSTYQA VVDQQAAIRM  300
YCKPKAEVSS SSALGLDMGA LAGADTSFLM PSSRSCLDLE ELFRGEALMD YSDMWKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	5e-79	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG011890.1