PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG011200.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 715aa    MW: 77222 Da    PI: 6.5841
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG011200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS422.14.7e-1293497141374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilk 92 
                       lv+lLl+cA++vs+gd+  a + L  l+  asp gd+mqR+a+yf+ ALa+rl+  s++ ++   +  + +   s ++l++++++++++P++k
  TRIDC2AG011200.1 349 LVHLLLACADFVSKGDQPSALRHLHLLRRVASPLGDSMQRVASYFADALATRLSVsSGTAISPRGAGAPYPFPPSPDTLKIYQILYQACPYIK 441
                       68***************************************************9845555555444444444459****************** PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       f+h+taNqaI ea++ge+rvH++D+di qG QWpa+lqaLa+Rp+gpp+lR+Tgvg+     +++++etg+ La++A++l+vpfef++ va++
  TRIDC2AG011200.1 442 FAHFTANQAIFEAFHGEDRVHVVDLDILQGYQWPAFLQALAARPGGPPTLRLTGVGH----PATAVRETGRHLASLAASLRVPFEFHAAVADK 530
                       *********************************************************....88****************************** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       le l++ +L+ + gEalaVn v ++hr++   ++l      +L+++++  Pk++++veqea hn++ Fl rfleal+yysa+fdsl+a++p++
  TRIDC2AG011200.1 531 LERLRPAALQRRVGEALAVNAVNRMHRVP--GAHLG----PLLSMIRDQAPKIMTLVEQEAGHNGPYFLGRFLEALHYYSAIFDSLDATFPAD 617
                       ****************************9..44444....5**************************************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       s  r+kvE+ ll++ei+nvvacegaer++rhe+l +Wr+ +e+ GF++vpls  a+ q + ll  ++ +dgyr++ee+g+l+lgW+dr+++ +
  TRIDC2AG011200.1 618 SAPRMKVEQCLLAPEIRNVVACEGAERVARHERLDRWRRIMEDRGFEAVPLSPAAVGQSQVLLGLYGaGDGYRLNEEKGCLLLGWQDRAIIGA 710
                       ********************************************************************************************* PP

              GRAS 371 SaWr 374
                       SaWr
  TRIDC2AG011200.1 711 SAWR 714
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MGTLNCAVDM SSGTKQLQHQ PAAPTSPTAS FSESNIVASS ADPDAIDALA GLQALRFDGD  60
IDGEIQSPDL AMWESLFADQ IGPGAASGAD FLMSSPRRDF SPLRDFMASS PKRDYMVSSP  120
KRDYMMSSPK RDYMVSSPKR EMVASPRRTF SSLYNNSTSQ QSYMHGTLHG MDTGSPSNLA  180
GYGKGKSSQS PLHKGFVNNA HSNSSKSNLS CSSSYVNNSE NLALPSLNSS FLEEGYLAYQ  240
LPPEKDAGGS SSAGTSATQL PTLSECLAMP EPVYGTRDEA AVGRGIQVGG LQPDHLYYAS  300
QFGAADGLPL QHQMAKPDQW ADSSSLHSML GSVIQSDQAE QEQDSGLQLV HLLLACADFV  360
SKGDQPSALR HLHLLRRVAS PLGDSMQRVA SYFADALATR LSVSSGTAIS PRGAGAPYPF  420
PPSPDTLKIY QILYQACPYI KFAHFTANQA IFEAFHGEDR VHVVDLDILQ GYQWPAFLQA  480
LAARPGGPPT LRLTGVGHPA TAVRETGRHL ASLAASLRVP FEFHAAVADK LERLRPAALQ  540
RRVGEALAVN AVNRMHRVPG AHLGPLLSMI RDQAPKIMTL VEQEAGHNGP YFLGRFLEAL  600
HYYSAIFDSL DATFPADSAP RMKVEQCLLA PEIRNVVACE GAERVARHER LDRWRRIMED  660
RGFEAVPLSP AAVGQSQVLL GLYGAGDGYR LNEEKGCLLL GWQDRAIIGA SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-102GRAS family protein