PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG010200.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 295aa    MW: 32912.1 Da    PI: 8.0107
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG010200.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.82.2e-35391292101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+++++++sws+ +nsfvv+d++ fa+ +Lp++Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC2AG010200.4  39 FLTKTYDMVDDPNTDSIMSWSAGNNSFVVWDPHAFATVLLPRHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 122
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i+r+k
  TRIDC2AG010200.4 123 KNIRRRK 129
                       *****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
PGLVKEEEEE GAHGRGDSPA VGAAPRPMEG LHDAGPPPFL TKTYDMVDDP NTDSIMSWSA  60
GNNSFVVWDP HAFATVLLPR HFKHSNFSSF VRQLNTYGFR KVDPDRWEFA NEGFLRGQRH  120
LLKNIRRRKP PAHTASNQQS LGSYLEVGHF GYDAEIDRLK RDKQLLMAEV VKLRQEQQNT  180
KARLKAMEDR LRGTEQKQQQ MTSFMARILR NPEFLKQLIA KNGMRKELHD AISKKRRRRI  240
DGGPEAYAVG ASTGLEGSVA LLADGLEGSV ELLVDGIPSD LDGSGIDSNG VTEPQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234239KKRRRR
2235240KRRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-104HSF family protein