 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TRIDC2AG009100.2 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
| Family | FAR1 | ||||||||
| Protein Properties | Length: 300aa MW: 34049.8 Da PI: 9.9949 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 32.2 | 3.5e-10 | 114 | 227 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........................tekerrtraetrtgCkaklkv 68
+fYn Y+ e GF ++ ks+ + ++ +++ vC ++ + + + + +++ + r++C a +++
TRIDC2AG009100.2 114 DFYNLYSWEKGFGICYGKSRLN-VERIKCMQEIVCGCSVSMNCIFLRriqevgahksrgdsellfcvghfaqGKAGVENTRSCRCECPALIRL 205
6*****************9999.44445667788877777766544456678888999***********99878888999************* PP
FAR1 69 kkekdgkwevtkleleHnHela 90
+ +d+ w++++ + HnH+l+
TRIDC2AG009100.2 206 LRAEDNGWYIAEHRDSHNHSLS 227
*******************996 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 300 aa Download sequence |
GIRWRRRRLD SRCGLPSGRQ IQRTRRSLMV SEAAADRRDV SPPNSELSTG KMNPRAPGWN 60 KRLRIGAAAP SRPPCPNRVS AFEKAVRNYA ENSRDNVVTP SIGTTFDSVG EAYDFYNLYS 120 WEKGFGICYG KSRLNVERIK CMQEIVCGCS VSMNCIFLRR IQEVGAHKSR GDSELLFCVG 180 HFAQGKAGVE NTRSCRCECP ALIRLLRAED NGWYIAEHRD SHNHSLSLNF GETLHWPSHK 240 HIDVYTRDLV KQLRQNNVNL AKVYSIIGGF FGSMDNVPFT KRSLRSLFVV ELTESTQKMM |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 3 | 12 | RWRRRRLDSR |
| 2 | 4 | 9 | WRRRRL |
| 3 | 5 | 14 | RWRRRRLDSR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G52520.1 | 6e-06 | FAR1 family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | TRIDC2AG009100.2 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|