PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG009100.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 268aa MW: 30491.7 Da PI: 10.1147

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG009100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.4	4.1e-12	116	195	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e GF ++ ks+ + ++ +++ vC ++gk+ e+++ + r++C a +++ + +d+ w++++ + HnH+l+ TRIDC2AG009100.1 116 DFYNLYSWEKGFGICYGKSRLN-VERIKCMQEIVCGCSGKAGVENTR---------SCRCECPALIRLLRAEDNGWYIAEHRDSHNHSLS 195 6***************9998.455567889999999999886555.........99***************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
WSGIRWRRRR LDSRCGLPSG RQIQRTRRSL MVSEAAADRR DVSPPNSELS TGKMNPRAPG 60 WNKRLRIGAA APSRPPCPNR VSAFEKAVRN YAENSRDNVV TPSIGTTFDS VGEAYDFYNL 120 YSWEKGFGIC YGKSRLNVER IKCMQEIVCG CSGKAGVENT RSCRCECPAL IRLLRAEDNG 180 WYIAEHRDSH NHSLSLNFGE TLHWPSHKHI DVYTRDLVKQ LRQNNVNLAK VYSIIGGFFG 240 SMDNVPFTKR SLRSLFVVEL TESTQKMM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	5	14	RWRRRRLDSR
2	6	11	WRRRRL
3	7	16	RWRRRRLDSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	4e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG009100.1