PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG006960.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 408aa MW: 46033.2 Da PI: 8.7411

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG006960.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.4	4.7e-52	64	192	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 l pGfrFhPtdeelv++yLkkk+++k++++ e i++ diyk++PwdLpk + +++e+ewyf+++rd+ky++++r+nr+t++g+Wkatg+d+++ TRIDC2AG006960.1 64 LLPGFRFHPTDEELVSFYLKKKIQQKPISI-ELIRQQDIYKFDPWDLPKlASTSSETEWYFYCPRDRKYRKSTRPNRVTATGFWKATGTDRPI 155 579*************************.89***********535556788******************************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ +++ vglkk+Lvfykgra +g ktdW+mhe+rl TRIDC2AG006960.1 156 YSSeGTRCVGLKKSLVFYKGRAARGIKTDWMMHEFRL 192 856667***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
GVLRRNGGCF FWCRFIPRSH LLAHCTSSTT RTSSLCKFVA SCISTQTFVR DMEGRDDVKS 60 DEILLPGFRF HPTDEELVSF YLKKKIQQKP ISIELIRQQD IYKFDPWDLP KLASTSSETE 120 WYFYCPRDRK YRKSTRPNRV TATGFWKATG TDRPIYSSEG TRCVGLKKSL VFYKGRAARG 180 IKTDWMMHEF RLPSLTDPSL PKRPIDKNIP LNDSWTICRI FKKTSSMAAQ RALSHAWGAT 240 LPGAPEQQHL LSAMQPVQAS HFASESSTSS LQVAAVAPSN HFISFNCGPS QQVLKGPIIL 300 PFQTQAPSGK TMRTVPPPLF FDAHFGQPEQ IAGFVTGSSV DVNSSMSCRD QESSTTKRGG 360 NFRNNEWEAP ERLDFPFGLV EDSSDDWECN IPWESFLSPT VPAEIPQH

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

GVLRRNGGCF FWCRFIPRSH LLAHCTSSTT RTSSLCKFVA SCISTQTFVR DMEGRDDVKS  60
DEILLPGFRF HPTDEELVSF YLKKKIQQKP ISIELIRQQD IYKFDPWDLP KLASTSSETE  120
WYFYCPRDRK YRKSTRPNRV TATGFWKATG TDRPIYSSEG TRCVGLKKSL VFYKGRAARG  180
IKTDWMMHEF RLPSLTDPSL PKRPIDKNIP LNDSWTICRI FKKTSSMAAQ RALSHAWGAT  240
LPGAPEQQHL LSAMQPVQAS HFASESSTSS LQVAAVAPSN HFISFNCGPS QQVLKGPIIL  300
PFQTQAPSGK TMRTVPPPLF FDAHFGQPEQ IAGFVTGSSV DVNSSMSCRD QESSTTKRGG  360
NFRNNEWEAP ERLDFPFGLV EDSSDDWECN IPWESFLSPT VPAEIPQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-91	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG006960.1