PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG006950.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 383aa MW: 43286.9 Da PI: 8.4573

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG006950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.2	2.6e-52	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 l+pGfrFhPtdeelv++yLkkk+++k++++ e i+++diyk++PwdLpk + +++e+ewyf+++rd+ky+++ r+nr+t++g+Wkatg+d+++ TRIDC2AG006950.1 15 LMPGFRFHPTDEELVSFYLKKKIQQKPISI-ELIRQLDIYKFDPWDLPKlANTGGETEWYFYCPRDRKYRNSARPNRVTAAGFWKATGTDRPI 106 689*************************.89***********624445778********************************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ +++ vglkk+Lvfykgra +g ktdW+mhe+rl TRIDC2AG006950.1 107 YSSkGTRCVGLKKSLVFYKGRAARGIKTDWMMHEFRL 143 9856667**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
RDMEGRDDVK SEEILMPGFR FHPTDEELVS FYLKKKIQQK PISIELIRQL DIYKFDPWDL 60 PKLANTGGET EWYFYCPRDR KYRNSARPNR VTAAGFWKAT GTDRPIYSSK GTRCVGLKKS 120 LVFYKGRAAR GIKTDWMMHE FRLPSLADPS LPKRPIDKTI PLNDSWTICR IFKKTSSMAA 180 QRALTHTWEP PLPGATKQDL FSAMQASHFA SESSSNSLQV AATAPSSQFD RKYGFQGQQQ 240 FQKPNNTQEG GSSCKVISFN CSPSPQILKG PIILPFQTQP PSQKPVPHTA PPFFIGTQFG 300 QPEQITGFVT GSSEDVNAEM SCRDQESSTM KHGDTSRMKN EWEAPGRLNF PFDLGADSSD 360 DWECNIPWES FLSPTVPAEI TQY

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

RDMEGRDDVK SEEILMPGFR FHPTDEELVS FYLKKKIQQK PISIELIRQL DIYKFDPWDL  60
PKLANTGGET EWYFYCPRDR KYRNSARPNR VTAAGFWKAT GTDRPIYSSK GTRCVGLKKS  120
LVFYKGRAAR GIKTDWMMHE FRLPSLADPS LPKRPIDKTI PLNDSWTICR IFKKTSSMAA  180
QRALTHTWEP PLPGATKQDL FSAMQASHFA SESSSNSLQV AATAPSSQFD RKYGFQGQQQ  240
FQKPNNTQEG GSSCKVISFN CSPSPQILKG PIILPFQTQP PSQKPVPHTA PPFFIGTQFG  300
QPEQITGFVT GSSEDVNAEM SCRDQESSTM KHGDTSRMKN EWEAPGRLNF PFDLGADSSD  360
DWECNIPWES FLSPTVPAEI TQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	3e-95	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG006950.1