PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG005830.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 408aa MW: 45014 Da PI: 4.4868

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG005830.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56.7	8.1e-18	36	146	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvg 101 +deelv ++L+++ ++++l++ +v+ +d+ ++P+d + wy + d + y +g+ r++k gyWk + + ++++ g TRIDC2AG005830.2 36 SDEELV-RFLAERKADDSLPE-NVLVGMDLSLIHPQDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAG 119 69**.89999999999999.89*********85.....4577887665541457799*********99875544.4.5789 PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k +L fy+g+ap+g++t+W+mhey++ TRIDC2AG005830.2 120 VKFSLEFYEGEAPSGKRTQWLMHEYQV 146 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
RRSAAGRPTR VDSGTIMCPP LGTPTEMDYS ISDSWSDEEL VRFLAERKAD DSLPENVLVG 60 MDLSLIHPQD SSPGNIWYLN QSDDQQPYGN GESDIRKAKG GYWKCIDVLR IPTSKSTAGV 120 KFSLEFYEGE APSGKRTQWL MHEYQVEQND EANVPQEYKS LCTILMQGSK KLDTEDELLS 180 LSTNAPNDHL ESYLQYLADM EEQNVAVNSK IVSSSQQNSS SREGKDIYED YNAADGVDFV 240 NALANEDYIE MKDLLSSDGS ASTSEFSSRR SEEYFDSDAL LRELLNDQNT TREIHQDCNH 300 NIAGPTKSDC VVISPPEQGL VHNHDNGAMV AGTSLEKAAS DSERDQHSSD QCLDHHPPAS 360 SCSQNSHVEQ SHSNSSSSSH GSTTSPQRSR SIGKLGKIGK KYCCLGSF

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

RRSAAGRPTR VDSGTIMCPP LGTPTEMDYS ISDSWSDEEL VRFLAERKAD DSLPENVLVG  60
MDLSLIHPQD SSPGNIWYLN QSDDQQPYGN GESDIRKAKG GYWKCIDVLR IPTSKSTAGV  120
KFSLEFYEGE APSGKRTQWL MHEYQVEQND EANVPQEYKS LCTILMQGSK KLDTEDELLS  180
LSTNAPNDHL ESYLQYLADM EEQNVAVNSK IVSSSQQNSS SREGKDIYED YNAADGVDFV  240
NALANEDYIE MKDLLSSDGS ASTSEFSSRR SEEYFDSDAL LRELLNDQNT TREIHQDCNH  300
NIAGPTKSDC VVISPPEQGL VHNHDNGAMV AGTSLEKAAS DSERDQHSSD QCLDHHPPAS  360
SCSQNSHVEQ SHSNSSSSSH GSTTSPQRSR SIGKLGKIGK KYCCLGSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	8e-16	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG005830.2