PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG002010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 550aa    MW: 64510.6 Da    PI: 7.5737
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG002010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR176.94e-2425119191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       +fYn+YA e GFsvrks+ +    n+ i+ r+ vCs++g+re+++ k   ++++rr+r+ tr+gC+akl++++++ +g w v++++ eH H+l
  TRIDC2AG002010.1  25 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFREDKHMKrkmEDRKRRPRSLTRVGCNAKLVITRQEeTGGWFVKDFVDEHIHPL 117
                       6******************************************999888889999*******************99****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC2AG002010.1 118 AP 119
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
ASDESMFEYV NVVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNK YIILRKIVCS  60
RQGFREDKHM KRKMEDRKRR PRSLTRVGCN AKLVITRQEE TGGWFVKDFV DEHIHPLAPR  120
DLSCLLRSHR RISDEQKADI ADMEKCGIRK YRIMDILCFQ YGGFDKVRCI KRDVYNFCHA  180
NKQETISAGD AKTVIMHMMA RRERDVDFFF KYLVDEHGHP KGLFWADSQS RLDYEAFGDV  240
IVFDSTYRTN KYNLPFVPFV GLNHHRNTVI FGCGIISHET SQAYEWMLQT FSDCMAQKHP  300
ISVITYGDLA MQRAIRVVWP DSNHRLSIRH IQQNIVRHLH DDDVKEEFRS FIYDTSSIEE  360
HEIKWIQFLQ RNKVTSEESW LHQMYQMRKL WCAPYLEGRC FLGLSSNQRS ESLNSVLHTH  420
LEGKMSLFEM LEHYERCLAS RRINEALHDV EALQSVPFTE ENASPLEKHA ATVFTPSVFK  480
MVLWSIDAVS KCQIREILDG SEDSTYVVSK QERMDKKFGV RIEEQGGLLH RMSCSCRKLE  540
CAGTPCSHIF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17681DRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-90FAR1 family protein