PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG000380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 335aa    MW: 34361.8 Da    PI: 8.1609
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG000380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.00085134156123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+C  Cgk+F++   L  H  +H
  TRIDC2AG000380.1 134 YECRTCGKCFPSFQALGGHRTSH 156
                       99*********999998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
GYGTPPAALA AIVVKGKRSK RRRVHAAAEA EVTAVTTASA AGEVASSSSS VADGGGWRSG  60
ADEAASGCVT EEEEDMALCL MLLARGGGGQ GSRAGPSSSS SSVVVRDDVA VATAREGKFR  120
SRRPADGGEG EFVYECRTCG KCFPSFQALG GHRTSHKKPR LPLPLPPTTA TTASSEEKMK  180
LPPQAAEEKT PPPSPAAAVD RTVLAIPVPA TPPKQEATAT GVSSKQQGQG RVHECSICGA  240
EFGSGQALGG HMRRHRPLLP ASASVSSTDD VAAVLVIRKE KSLLELDLNM PAPCDDAATA  300
TSPGSFTFAV KERPSVPAAL LPFRAPASAL VDCHF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12024KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.19e-32C2H2 family protein