PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG069860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 356aa    MW: 38839.3 Da    PI: 6.2845
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG069860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS312.11.3e-952232076373
              GRAS  76 eelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakf 168
                       ++   ++ f+++ P+lkf+h+taNqaIlea+eg++rvH++D+ i+qG+QW +L+qaL+ Rp+gpps+RiTg+gs     + ++ e g rLa++
  TRIDC1BG069860.1  22 RAGELYRQFYDAGPYLKFAHFTANQAILEAFEGCDRVHVVDLAIKQGVQWTTLIQALSIRPGGPPSVRITGIGS-----APAVDEAGLRLAEL 109
                       34567889******************************************************************.....89************ PP

              GRAS 169 AeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrll....desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                       A++++vpf+f+ ++ ++l++l++++++v pgEa+aVn++ qlhrll    + s+sl+ ++d vL  + s++P+v++vveqeadhn++++ +rf
  TRIDC1BG069860.1 110 ARAMNVPFSFQRFTDDSLDQLKPWMFQVLPGEAVAVNSICQLHRLLvdpdAASTSLPTPIDVVLGWIASMQPRVFTVVEQEADHNKPRLPTRF 202
                       ************9999******************************5555555666669********************************** PP

              GRAS 258 lealeyysalfdsl.eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg 348
                        +a+ yy +++ds+ +++++r     +     ++++rei ++v+ eg++r+erhe l+ W +rl ++G++ vpl+ +aa qa  l+r+++  g
  TRIDC1BG069860.1 203 ENAMFYYGSVLDSMeAMSVSRGGvIGNGAGADAYVQREIFDIVCGEGSARTERHEPLACWCARLWRMGLTHVPLGPSAAYQAAKLVRMYSTAG 295
                       **************66677777774555566677*********************************************************** PP

              GRAS 349 yrveeesgslvlgWkdrpLvsvSaW 373
                       +rv+e  g+l l+W++rpL+++S+W
  TRIDC1BG069860.1 296 FRVQEIGGCLSLMWHERPLFTASVW 320
                       ************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
LAHRLFPASP HSSFTLDASP ERAGELYRQF YDAGPYLKFA HFTANQAILE AFEGCDRVHV  60
VDLAIKQGVQ WTTLIQALSI RPGGPPSVRI TGIGSAPAVD EAGLRLAELA RAMNVPFSFQ  120
RFTDDSLDQL KPWMFQVLPG EAVAVNSICQ LHRLLVDPDA ASTSLPTPID VVLGWIASMQ  180
PRVFTVVEQE ADHNKPRLPT RFENAMFYYG SVLDSMEAMS VSRGGVIGNG AGADAYVQRE  240
IFDIVCGEGS ARTERHEPLA CWCARLWRMG LTHVPLGPSA AYQAAKLVRM YSTAGFRVQE  300
IGGCLSLMWH ERPLFTASVW SAMPADGAAE ERADKHKLKM SIGESSSGHL PDAGAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.14e-75GRAS family protein