PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG067240.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 618aa    MW: 67945.5 Da    PI: 8.8139
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG067240.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B378.76e-25150251199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + 
  TRIDC1BG067240.2 150 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RG 239
                       99****************************963.3445679************************************************..34 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       +++el+++v+r+
  TRIDC1BG067240.2 240 DDGELRLGVRRA 251
                       89999***9996 PP
2Auxin_resp101.11.5e-33276360182
        Auxin_resp   1 aahaastksvFevvYnP....rastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                       +aha++tks+F+++YnP    + s+seF+v+++k+ k++++++s+G Rfkm++e+ed++err++G+++g+ d+dp  W++SkW++L
  TRIDC1BG067240.2 276 VAHAVATKSMFQIFYNPsckyWLSQSEFIVPYWKFAKSFSQPFSAGLRFKMRYESEDAAERRYTGIITGTGDADP-MWRGSKWKCL 360
                       79***************5555579***************************************************.9********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    
GGDRPQHRGG GRGGVLRGGS SSVATPPPPP PPRPSAVCLE LWHACAGPVA PMPRKGGVVV  60
YLPQGHLDHL GDAPAHAAPS PAAVPPHVFC RVVDVTLHAD ASTDEVYAQL SLLPENEEVV  120
RRMREATEDG SGGEDGETVK QRFARMPHMF CKTLTASDTS THGGFSVPRR AAEDCFPPLD  180
YSQQRPSQEL VAKDLHGTEW KFRHIYRGQP RRHLLTTGWS AFVNKKKLVS GDAVLFLRGD  240
DGELRLGVRR AVQLKNGSAF PALYSQCSNL GTLANVAHAV ATKSMFQIFY NPSCKYWLSQ  300
SEFIVPYWKF AKSFSQPFSA GLRFKMRYES EDAAERRYTG IITGTGDADP MWRGSKWKCL  360
LVRWDDDGEF RRPNRVSPWE IELTSSASGS HLAAPTSKRM KPYLPHANPD FTVPHGGGRP  420
DFAESAQLRK VLQGQELLGY RTHDGTAVAT SQPCEARNLQ YIDERGCSNN GSNNVLGGIP  480
SHGVRTPLGI PYHCSGFGES QRFQKVLQGQ EVFRPYRGSL VDARMRNGGF QQQDGPYASA  540
LLDKWRAQQQ HAFGFGPPAP VLPSQPSLSP PSVLMFQLDT DPKVSRFEFG HGHLDKNVDD  600
PYARFVSAEG IGRGEQML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-157ARF family protein